Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CCNFP41002 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCNFP41002 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCNFP41002 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCNFP41002 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCNFP41002 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCNFP41002 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.08■□□□□ 0.81
CCNFP41002 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCNFP41002 AC073111.5-205ENST00000641717 521 ntBASIC20.08■□□□□ 0.81
CCNFP41002 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCNFP41002 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CCNFP41002 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.08■□□□□ 0.8
CCNFP41002 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.08■□□□□ 0.8
CCNFP41002 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CCNFP41002 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.08■□□□□ 0.8
CCNFP41002 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CCNFP41002 TREX1-205ENST00000625293 1783 ntBASIC20.08■□□□□ 0.8
CCNFP41002 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCNFP41002 AC098818.2-201ENST00000564925 2320 ntBASIC20.08■□□□□ 0.8
CCNFP41002 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCNFP41002 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCNFP41002 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCNFP41002 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.08■□□□□ 0.8
CCNFP41002 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CCNFP41002 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CCNFP41002 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCNFP41002 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CCNFP41002 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCNFP41002 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCNFP41002 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCNFP41002 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCNFP41002 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCNFP41002 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCNFP41002 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCNFP41002 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCNFP41002 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.07■□□□□ 0.8
CCNFP41002 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.07■□□□□ 0.8
CCNFP41002 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.07■□□□□ 0.8
CCNFP41002 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
CCNFP41002 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCNFP41002 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCNFP41002 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCNFP41002 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.06■□□□□ 0.8
CCNFP41002 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCNFP41002 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.06■□□□□ 0.8
CCNFP41002 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCNFP41002 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CCNFP41002 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.06■□□□□ 0.8
CCNFP41002 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCNFP41002 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCNFP41002 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.06■□□□□ 0.8
CCNFP41002 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.06■□□□□ 0.8
CCNFP41002 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CCNFP41002 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCNFP41002 AC068338.2-201ENST00000563278 1430 ntBASIC20.06■□□□□ 0.8
CCNFP41002 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCNFP41002 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
CCNFP41002 AC005332.7-201ENST00000614046 2005 ntBASIC20.06■□□□□ 0.8
CCNFP41002 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCNFP41002 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCNFP41002 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCNFP41002 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCNFP41002 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.06■□□□□ 0.8
CCNFP41002 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCNFP41002 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.05■□□□□ 0.8
CCNFP41002 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCNFP41002 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCNFP41002 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCNFP41002 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCNFP41002 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCNFP41002 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCNFP41002 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.05■□□□□ 0.8
CCNFP41002 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCNFP41002 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCNFP41002 CDCA4P2-201ENST00000441182 718 ntBASIC20.05■□□□□ 0.8
CCNFP41002 AC026185.1-201ENST00000445748 174 ntBASIC20.05■□□□□ 0.8
CCNFP41002 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.05■□□□□ 0.8
CCNFP41002 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.05■□□□□ 0.8
CCNFP41002 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.05■□□□□ 0.8
CCNFP41002 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCNFP41002 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCNFP41002 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.05■□□□□ 0.8
CCNFP41002 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CCNFP41002 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCNFP41002 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCNFP41002 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCNFP41002 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCNFP41002 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCNFP41002 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCNFP41002 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCNFP41002 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCNFP41002 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.04■□□□□ 0.8
CCNFP41002 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.04■□□□□ 0.8
CCNFP41002 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.04■□□□□ 0.8
CCNFP41002 AC069236.1-201ENST00000604339 616 ntBASIC20.04■□□□□ 0.8
CCNFP41002 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.04■□□□□ 0.8
CCNFP41002 AC008694.1-202ENST00000636953 945 ntBASIC20.04■□□□□ 0.8
CCNFP41002 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CCNFP41002 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCNFP41002 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms