Protein–RNA interactions for Protein: P40987

CIN1, Chromosome instability protein 1, yeastyeast

Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIN1P40987 YFR012W-AYFR012W-A 87 nt1.24□□□□□ -2.21
CIN1P40987 YGL182CYGL182C 324 nt1.24□□□□□ -2.21
CIN1P40987 RPL26BYGR034W 384 nt1.24□□□□□ -2.21
CIN1P40987 YNL284C-BYNL284C-B 5268 nt1.24□□□□□ -2.21
CIN1P40987 LAA1YJL207C 6045 nt1.22□□□□□ -2.21
CIN1P40987 tL(UAA)QtL(UAA)Q 85 nt1.21□□□□□ -2.22
CIN1P40987 Q0143Q0143 153 nt1.21□□□□□ -2.22
CIN1P40987 snR190snR190 190 nt1.21□□□□□ -2.22
CIN1P40987 SEC3YER008C 4011 nt1.21□□□□□ -2.22
CIN1P40987 CHS6YJL099W 2241 nt1.2□□□□□ -2.22
CIN1P40987 YBL039C-AYBL039C-A 84 nt1.2□□□□□ -2.22
CIN1P40987 FYV10YIL097W 1551 nt1.19□□□□□ -2.22
CIN1P40987 TAH1YCR060W 336 nt1.18□□□□□ -2.22
CIN1P40987 YGR130CYGR130C 2451 nt1.18□□□□□ -2.22
CIN1P40987 RAD9YDR217C 3930 nt1.17□□□□□ -2.22
CIN1P40987 CLU1YMR012W 3834 nt1.17□□□□□ -2.22
CIN1P40987 CDC39YCR093W 6327 nt1.17□□□□□ -2.22
CIN1P40987 ASE1YOR058C 2658 nt1.17□□□□□ -2.22
CIN1P40987 STB6YKL072W 2301 nt1.16□□□□□ -2.22
CIN1P40987 YLR041WYLR041W 321 nt1.16□□□□□ -2.22
CIN1P40987 YCL001W-BYCL001W-B 255 nt1.15□□□□□ -2.23
CIN1P40987 YLR232WYLR232W 348 nt1.14□□□□□ -2.23
CIN1P40987 YOR329W-AYOR329W-A 210 nt1.14□□□□□ -2.23
CIN1P40987 IML1YJR138W 4755 nt1.12□□□□□ -2.23
CIN1P40987 ROM2YLR371W 4071 nt1.12□□□□□ -2.23
CIN1P40987 tV(UAC)BtV(UAC)B 74 nt1.12□□□□□ -2.23
CIN1P40987 tV(UAC)DtV(UAC)D 74 nt1.12□□□□□ -2.23
CIN1P40987 YNL205CYNL205C 423 nt1.12□□□□□ -2.23
CIN1P40987 SEC8YPR055W 3198 nt1.12□□□□□ -2.23
CIN1P40987 PRP16YKR086W 3216 nt1.11□□□□□ -2.23
CIN1P40987 snR85snR85 171 nt1.1□□□□□ -2.23
CIN1P40987 YDR544CYDR544C 429 nt1.09□□□□□ -2.23
CIN1P40987 tM(CAU)Q2tM(CAU)Q2 78 nt1.09□□□□□ -2.23
CIN1P40987 QCR9YGR183C 201 nt1.09□□□□□ -2.23
CIN1P40987 YNL067W-BYNL067W-B 141 nt1.09□□□□□ -2.23
CIN1P40987 NST1YNL091W 3723 nt1.09□□□□□ -2.24
CIN1P40987 YJR029WYJR029W 5268 nt1.09□□□□□ -2.24
CIN1P40987 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.24
CIN1P40987 YHR131W-AYHR131W-A 246 nt1.07□□□□□ -2.24
CIN1P40987 YLR399W-AYLR399W-A 105 nt1.07□□□□□ -2.24
CIN1P40987 BUD3YCL014W 4911 nt1.07□□□□□ -2.24
CIN1P40987 YPR160W-AYPR160W-A 81 nt1.06□□□□□ -2.24
CIN1P40987 snR39BsnR39B 96 nt1.06□□□□□ -2.24
CIN1P40987 SPT7YBR081C 3999 nt1.06□□□□□ -2.24
CIN1P40987 BEM3YPL115C 3387 nt1.05□□□□□ -2.24
CIN1P40987 SIP4YJL089W 2490 nt1.05□□□□□ -2.24
CIN1P40987 OST4YDL232W 111 nt1.05□□□□□ -2.24
CIN1P40987 tN(GUU)QtN(GUU)Q 71 nt1.05□□□□□ -2.24
CIN1P40987 KAP120YPL125W 3099 nt1.04□□□□□ -2.24
CIN1P40987 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
CIN1P40987 SOM1YEL059C-A 225 nt1.04□□□□□ -2.24
CIN1P40987 YCR095W-AYCR095W-A 159 nt1.03□□□□□ -2.24
CIN1P40987 YBR099CYBR099C 384 nt1.03□□□□□ -2.24
CIN1P40987 YIL071W-AYIL071W-A 477 nt1.02□□□□□ -2.25
CIN1P40987 YDL073WYDL073W 2955 nt1.01□□□□□ -2.25
CIN1P40987 COG6YNL041C 2520 nt1□□□□□ -2.25
CIN1P40987 UBP3YER151C 2739 nt0.98□□□□□ -2.25
CIN1P40987 YDR210WYDR210W 228 nt0.98□□□□□ -2.25
CIN1P40987 YJL127W-AYJL127W-A 117 nt0.98□□□□□ -2.25
CIN1P40987 YSP1YHR155W 3687 nt0.97□□□□□ -2.25
CIN1P40987 BEM2YER155C 6504 nt0.96□□□□□ -2.26
CIN1P40987 SCC2YDR180W 4482 nt0.96□□□□□ -2.26
CIN1P40987 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
CIN1P40987 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
CIN1P40987 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
CIN1P40987 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
CIN1P40987 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
CIN1P40987 STF2YGR008C 255 nt0.94□□□□□ -2.26
CIN1P40987 HUG1YML058W-A 207 nt0.94□□□□□ -2.26
CIN1P40987 SEC1YDR164C 2175 nt0.93□□□□□ -2.26
CIN1P40987 PMP2YEL017C-A 132 nt0.93□□□□□ -2.26
CIN1P40987 YBR072C-AYBR072C-A 162 nt0.93□□□□□ -2.26
CIN1P40987 YGR146C-AYGR146C-A 162 nt0.92□□□□□ -2.26
CIN1P40987 RKR1YMR247C 4689 nt0.91□□□□□ -2.26
CIN1P40987 GLG1YKR058W 1851 nt0.89□□□□□ -2.27
CIN1P40987 DOP1YDR141C 5097 nt0.86□□□□□ -2.27
CIN1P40987 RPM2YML091C 3609 nt0.85□□□□□ -2.27
CIN1P40987 YNL103W-AYNL103W-A 90 nt0.85□□□□□ -2.27
CIN1P40987 ULP2YIL031W 3105 nt0.85□□□□□ -2.27
CIN1P40987 YLL006W-AYLL006W-A 177 nt0.84□□□□□ -2.27
CIN1P40987 BIR1YJR089W 2865 nt0.83□□□□□ -2.28
CIN1P40987 NNF2YGR089W 2811 nt0.83□□□□□ -2.28
CIN1P40987 YPR117WYPR117W 7470 nt0.83□□□□□ -2.28
CIN1P40987 TFB5YDR079C-A 219 nt0.81□□□□□ -2.28
CIN1P40987 YNL266WYNL266W 420 nt0.81□□□□□ -2.28
CIN1P40987 PAU24YBR301W 363 nt0.81□□□□□ -2.28
CIN1P40987 snR61snR61 90 nt0.8□□□□□ -2.28
CIN1P40987 CSE1YGL238W 2883 nt0.8□□□□□ -2.28
CIN1P40987 YBR178WYBR178W 375 nt0.78□□□□□ -2.28
CIN1P40987 RCO1YMR075W 2055 nt0.77□□□□□ -2.29
CIN1P40987 YOR192C-BYOR192C-B 5313 nt0.77□□□□□ -2.29
CIN1P40987 YBL109WYBL109W 336 nt0.76□□□□□ -2.29
CIN1P40987 YDR524C-AYDR524C-A 120 nt0.75□□□□□ -2.29
CIN1P40987 YGL041C-BYGL041C-B 183 nt0.73□□□□□ -2.29
CIN1P40987 YMR326CYMR326C 309 nt0.73□□□□□ -2.29
CIN1P40987 NIP1YMR309C 2439 nt0.73□□□□□ -2.29
CIN1P40987 PET111YMR257C 2403 nt0.72□□□□□ -2.29
CIN1P40987 YBR196C-AYBR196C-A 150 nt0.71□□□□□ -2.3
CIN1P40987 SEC10YLR166C 2616 nt0.71□□□□□ -2.3
CIN1P40987 RPS26AYGL189C 360 nt0.69□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 28.1 ms