Protein–RNA interactions for Protein: P38886

RPN10, 26S proteasome regulatory subunit RPN10, yeastyeast

Known RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN10P38886 YLR041WYLR041W 321 nt1.47□□□□□ -2.17
RPN10P38886 LAA1YJL207C 6045 nt1.47□□□□□ -2.17
RPN10P38886 RPL26BYGR034W 384 nt1.46□□□□□ -2.18
RPN10P38886 PIK1YNL267W 3201 nt1.46□□□□□ -2.18
RPN10P38886 snR48snR48 113 nt1.45□□□□□ -2.18
RPN10P38886 YOR102WYOR102W 351 nt1.43□□□□□ -2.18
RPN10P38886 snR190snR190 190 nt1.43□□□□□ -2.18
RPN10P38886 PRP16YKR086W 3216 nt1.43□□□□□ -2.18
RPN10P38886 YML002WYML002W 2214 nt1.43□□□□□ -2.18
RPN10P38886 GEA2YEL022W 4380 nt1.43□□□□□ -2.18
RPN10P38886 YHL015W-AYHL015W-A 84 nt1.42□□□□□ -2.18
RPN10P38886 YGL182CYGL182C 324 nt1.41□□□□□ -2.18
RPN10P38886 UTP8YGR128C 2142 nt1.39□□□□□ -2.19
RPN10P38886 HKR1YDR420W 5409 nt1.38□□□□□ -2.19
RPN10P38886 YBL039C-AYBL039C-A 84 nt1.38□□□□□ -2.19
RPN10P38886 tL(UAA)QtL(UAA)Q 85 nt1.37□□□□□ -2.19
RPN10P38886 IML1YJR138W 4755 nt1.37□□□□□ -2.19
RPN10P38886 FYV10YIL097W 1551 nt1.37□□□□□ -2.19
RPN10P38886 YNL284C-BYNL284C-B 5268 nt1.37□□□□□ -2.19
RPN10P38886 YOR314W-AYOR314W-A 111 nt1.35□□□□□ -2.19
RPN10P38886 SEC8YPR055W 3198 nt1.35□□□□□ -2.19
RPN10P38886 TAH1YCR060W 336 nt1.33□□□□□ -2.2
RPN10P38886 SEC21YNL287W 2808 nt1.33□□□□□ -2.2
RPN10P38886 RAD9YDR217C 3930 nt1.33□□□□□ -2.2
RPN10P38886 RPM2YML091C 3609 nt1.32□□□□□ -2.2
RPN10P38886 YIL020C-AYIL020C-A 339 nt1.31□□□□□ -2.2
RPN10P38886 YPR160W-AYPR160W-A 81 nt1.31□□□□□ -2.2
RPN10P38886 CHS6YJL099W 2241 nt1.3□□□□□ -2.2
RPN10P38886 YLR399W-AYLR399W-A 105 nt1.3□□□□□ -2.2
RPN10P38886 tV(UAC)BtV(UAC)B 74 nt1.29□□□□□ -2.2
RPN10P38886 tV(UAC)DtV(UAC)D 74 nt1.29□□□□□ -2.2
RPN10P38886 SIP4YJL089W 2490 nt1.29□□□□□ -2.2
RPN10P38886 YLR232WYLR232W 348 nt1.27□□□□□ -2.21
RPN10P38886 YHR131W-AYHR131W-A 246 nt1.26□□□□□ -2.21
RPN10P38886 YOR329W-AYOR329W-A 210 nt1.26□□□□□ -2.21
RPN10P38886 YDL073WYDL073W 2955 nt1.25□□□□□ -2.21
RPN10P38886 tN(GUU)QtN(GUU)Q 71 nt1.24□□□□□ -2.21
RPN10P38886 NST1YNL091W 3723 nt1.2□□□□□ -2.22
RPN10P38886 snR39BsnR39B 96 nt1.2□□□□□ -2.22
RPN10P38886 YJR029WYJR029W 5268 nt1.19□□□□□ -2.22
RPN10P38886 YPR137C-BYPR137C-B 5268 nt1.19□□□□□ -2.22
RPN10P38886 BEM2YER155C 6504 nt1.19□□□□□ -2.22
RPN10P38886 SPT7YBR081C 3999 nt1.18□□□□□ -2.22
RPN10P38886 Q0143Q0143 153 nt1.18□□□□□ -2.22
RPN10P38886 YCL001W-BYCL001W-B 255 nt1.18□□□□□ -2.22
RPN10P38886 YDR544CYDR544C 429 nt1.17□□□□□ -2.22
RPN10P38886 QCR9YGR183C 201 nt1.17□□□□□ -2.22
RPN10P38886 YSP1YHR155W 3687 nt1.17□□□□□ -2.22
RPN10P38886 PAU12YGR294W 363 nt1.15□□□□□ -2.23
RPN10P38886 YNL067W-BYNL067W-B 141 nt1.15□□□□□ -2.23
RPN10P38886 PAU24YBR301W 363 nt1.15□□□□□ -2.23
RPN10P38886 OST4YDL232W 111 nt1.14□□□□□ -2.23
RPN10P38886 COG6YNL041C 2520 nt1.14□□□□□ -2.23
RPN10P38886 tM(CAU)Q2tM(CAU)Q2 78 nt1.13□□□□□ -2.23
RPN10P38886 YIL071W-AYIL071W-A 477 nt1.13□□□□□ -2.23
RPN10P38886 SEC1YDR164C 2175 nt1.12□□□□□ -2.23
RPN10P38886 VAM6YDL077C 3150 nt1.12□□□□□ -2.23
RPN10P38886 YPR117WYPR117W 7470 nt1.11□□□□□ -2.23
RPN10P38886 DOP1YDR141C 5097 nt1.1□□□□□ -2.23
RPN10P38886 SCC2YDR180W 4482 nt1.1□□□□□ -2.23
RPN10P38886 YDR210WYDR210W 228 nt1.1□□□□□ -2.23
RPN10P38886 UBP3YER151C 2739 nt1.1□□□□□ -2.23
RPN10P38886 BUD3YCL014W 4911 nt1.1□□□□□ -2.23
RPN10P38886 RKR1YMR247C 4689 nt1.09□□□□□ -2.23
RPN10P38886 YCR095W-AYCR095W-A 159 nt1.08□□□□□ -2.24
RPN10P38886 BEM3YPL115C 3387 nt1.08□□□□□ -2.24
RPN10P38886 ULP2YIL031W 3105 nt1.07□□□□□ -2.24
RPN10P38886 YPL060C-AYPL060C-A 3315 nt1.06□□□□□ -2.24
RPN10P38886 SOM1YEL059C-A 225 nt1.05□□□□□ -2.24
RPN10P38886 YGR146C-AYGR146C-A 162 nt1.03□□□□□ -2.24
RPN10P38886 YBR072C-AYBR072C-A 162 nt1.03□□□□□ -2.24
RPN10P38886 GLG1YKR058W 1851 nt1.03□□□□□ -2.25
RPN10P38886 tF(GAA)BtF(GAA)B 73 nt1.02□□□□□ -2.25
RPN10P38886 tF(GAA)FtF(GAA)F 73 nt1.02□□□□□ -2.25
RPN10P38886 tF(GAA)GtF(GAA)G 73 nt1.02□□□□□ -2.25
RPN10P38886 tF(GAA)H1tF(GAA)H1 73 nt1.02□□□□□ -2.25
RPN10P38886 tF(GAA)H2tF(GAA)H2 73 nt1.02□□□□□ -2.25
RPN10P38886 tF(GAA)MtF(GAA)M 73 nt1.02□□□□□ -2.25
RPN10P38886 tF(GAA)P1tF(GAA)P1 73 nt1.02□□□□□ -2.25
RPN10P38886 tF(GAA)P2tF(GAA)P2 73 nt1.02□□□□□ -2.25
RPN10P38886 YJL127W-AYJL127W-A 117 nt1.01□□□□□ -2.25
RPN10P38886 YBR099CYBR099C 384 nt1.01□□□□□ -2.25
RPN10P38886 snR85snR85 171 nt1□□□□□ -2.25
RPN10P38886 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
RPN10P38886 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
RPN10P38886 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
RPN10P38886 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
RPN10P38886 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
RPN10P38886 YNL205CYNL205C 423 nt0.98□□□□□ -2.25
RPN10P38886 UTP20YBL004W 7482 nt0.98□□□□□ -2.25
RPN10P38886 NNF2YGR089W 2811 nt0.97□□□□□ -2.25
RPN10P38886 BUL2YML111W 2763 nt0.97□□□□□ -2.25
RPN10P38886 LTE1YAL024C 4308 nt0.94□□□□□ -2.26
RPN10P38886 YLL006W-AYLL006W-A 177 nt0.94□□□□□ -2.26
RPN10P38886 BIR1YJR089W 2865 nt0.93□□□□□ -2.26
RPN10P38886 NIP1YMR309C 2439 nt0.9□□□□□ -2.27
RPN10P38886 RCO1YMR075W 2055 nt0.89□□□□□ -2.27
RPN10P38886 YIL142C-AYIL142C-A 333 nt0.89□□□□□ -2.27
RPN10P38886 YOR192C-BYOR192C-B 5313 nt0.86□□□□□ -2.27
RPN10P38886 YOL014WYOL014W 375 nt0.85□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 87.1 ms