Protein–RNA interactions for Protein: P35995

YKL222C, Uncharacterized transcriptional regulatory protein YKL222C, yeastyeast

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKL222CP35995 YJL127W-AYJL127W-A 117 nt2.06□□□□□ -2.08
YKL222CP35995 FRK1YPL141C 2598 nt2.06□□□□□ -2.08
YKL222CP35995 RTP1YMR185W 2946 nt2.06□□□□□ -2.08
YKL222CP35995 CHC1YGL206C 4962 nt2.05□□□□□ -2.08
YKL222CP35995 YLR149C-AYLR149C-A 87 nt2.04□□□□□ -2.08
YKL222CP35995 MSH5YDL154W 2706 nt2.03□□□□□ -2.08
YKL222CP35995 YKL096C-BYKL096C-B 150 nt2.03□□□□□ -2.08
YKL222CP35995 CAT8YMR280C 4302 nt2.03□□□□□ -2.09
YKL222CP35995 PKH2YOL100W 3246 nt2.02□□□□□ -2.09
YKL222CP35995 YGR130CYGR130C 2451 nt2.02□□□□□ -2.09
YKL222CP35995 AGC1YPR021C 2709 nt2.01□□□□□ -2.09
YKL222CP35995 YGR146C-AYGR146C-A 162 nt2.01□□□□□ -2.09
YKL222CP35995 YLR422WYLR422W 5799 nt2□□□□□ -2.09
YKL222CP35995 USO1YDL058W 5373 nt1.99□□□□□ -2.09
YKL222CP35995 MLH3YPL164C 2148 nt1.99□□□□□ -2.09
YKL222CP35995 PAU12YGR294W 363 nt1.99□□□□□ -2.09
YKL222CP35995 PAU24YBR301W 363 nt1.99□□□□□ -2.09
YKL222CP35995 MYO2YOR326W 4725 nt1.98□□□□□ -2.09
YKL222CP35995 PKH3YDR466W 2697 nt1.98□□□□□ -2.09
YKL222CP35995 TBS1YBR150C 3285 nt1.98□□□□□ -2.09
YKL222CP35995 YBR196C-AYBR196C-A 150 nt1.97□□□□□ -2.09
YKL222CP35995 YDL073WYDL073W 2955 nt1.96□□□□□ -2.1
YKL222CP35995 UBP3YER151C 2739 nt1.96□□□□□ -2.1
YKL222CP35995 UTP21YLR409C 2820 nt1.96□□□□□ -2.1
YKL222CP35995 HIR3YJR140C 4947 nt1.95□□□□□ -2.1
YKL222CP35995 YKL100W-AYKL100W-A 90 nt1.95□□□□□ -2.1
YKL222CP35995 SKI3YPR189W 4299 nt1.94□□□□□ -2.1
YKL222CP35995 YKL225WYKL225W 348 nt1.93□□□□□ -2.1
YKL222CP35995 SLI15YBR156C 2097 nt1.93□□□□□ -2.1
YKL222CP35995 YMR045CYMR045C 5268 nt1.93□□□□□ -2.1
YKL222CP35995 RAD9YDR217C 3930 nt1.93□□□□□ -2.1
YKL222CP35995 UBR2YLR024C 5619 nt1.92□□□□□ -2.1
YKL222CP35995 MMS4YBR098W 2076 nt1.92□□□□□ -2.1
YKL222CP35995 YLR041WYLR041W 321 nt1.92□□□□□ -2.1
YKL222CP35995 GCN2YDR283C 4980 nt1.92□□□□□ -2.1
YKL222CP35995 AZF1YOR113W 2745 nt1.91□□□□□ -2.1
YKL222CP35995 LAA1YJL207C 6045 nt1.91□□□□□ -2.1
YKL222CP35995 MEC1YBR136W 7107 nt1.89□□□□□ -2.11
YKL222CP35995 YLR419WYLR419W 4308 nt1.89□□□□□ -2.11
YKL222CP35995 YOR343W-BYOR343W-B 5313 nt1.89□□□□□ -2.11
YKL222CP35995 SEC21YNL287W 2808 nt1.89□□□□□ -2.11
YKL222CP35995 YDL159W-AYDL159W-A 132 nt1.89□□□□□ -2.11
YKL222CP35995 YMR247W-AYMR247W-A 144 nt1.89□□□□□ -2.11
YKL222CP35995 RSM22YKL155C 1887 nt1.88□□□□□ -2.11
YKL222CP35995 ALY2YJL084C 3141 nt1.88□□□□□ -2.11
YKL222CP35995 YCS4YLR272C 3531 nt1.88□□□□□ -2.11
YKL222CP35995 EMC5YIL027C 426 nt1.88□□□□□ -2.11
YKL222CP35995 WAR1YML076C 2835 nt1.88□□□□□ -2.11
YKL222CP35995 KCS1YDR017C 3153 nt1.88□□□□□ -2.11
YKL222CP35995 SEC10YLR166C 2616 nt1.87□□□□□ -2.11
YKL222CP35995 SPO24YPR036W-A 204 nt1.87□□□□□ -2.11
YKL222CP35995 PIK1YNL267W 3201 nt1.86□□□□□ -2.11
YKL222CP35995 CLU1YMR012W 3834 nt1.86□□□□□ -2.11
YKL222CP35995 RPM2YML091C 3609 nt1.85□□□□□ -2.11
YKL222CP35995 tT(UGU)HtT(UGU)H 72 nt1.85□□□□□ -2.11
YKL222CP35995 IML1YJR138W 4755 nt1.84□□□□□ -2.12
YKL222CP35995 RPL26BYGR034W 384 nt1.82□□□□□ -2.12
YKL222CP35995 NNF2YGR089W 2811 nt1.82□□□□□ -2.12
YKL222CP35995 BPH1YCR032W 6504 nt1.81□□□□□ -2.12
YKL222CP35995 BST1YFL025C 3090 nt1.81□□□□□ -2.12
YKL222CP35995 SMC1YFL008W 3678 nt1.79□□□□□ -2.12
YKL222CP35995 YBR200W-AYBR200W-A 165 nt1.78□□□□□ -2.12
YKL222CP35995 NUT1YGL151W 3399 nt1.78□□□□□ -2.12
YKL222CP35995 PAN2YGL094C 3348 nt1.78□□□□□ -2.13
YKL222CP35995 AI1Q0050 2505 nt1.77□□□□□ -2.13
YKL222CP35995 snR38snR38 95 nt1.76□□□□□ -2.13
YKL222CP35995 YAR009CYAR009C 3591 nt1.76□□□□□ -2.13
YKL222CP35995 snR190snR190 190 nt1.74□□□□□ -2.13
YKL222CP35995 KAP122YGL016W 3246 nt1.73□□□□□ -2.13
YKL222CP35995 YPL060C-AYPL060C-A 3315 nt1.73□□□□□ -2.13
YKL222CP35995 tD(GUC)QtD(GUC)Q 75 nt1.72□□□□□ -2.13
YKL222CP35995 PET127YOR017W 2403 nt1.72□□□□□ -2.13
YKL222CP35995 YLR299C-AYLR299C-A 93 nt1.71□□□□□ -2.14
YKL222CP35995 RAD50YNL250W 3939 nt1.71□□□□□ -2.14
YKL222CP35995 MSN5YDR335W 3675 nt1.7□□□□□ -2.14
YKL222CP35995 tH(GUG)E1tH(GUG)E1 72 nt1.69□□□□□ -2.14
YKL222CP35995 tH(GUG)E2tH(GUG)E2 72 nt1.69□□□□□ -2.14
YKL222CP35995 tH(GUG)G1tH(GUG)G1 72 nt1.69□□□□□ -2.14
YKL222CP35995 tH(GUG)G2tH(GUG)G2 72 nt1.69□□□□□ -2.14
YKL222CP35995 tH(GUG)HtH(GUG)H 72 nt1.69□□□□□ -2.14
YKL222CP35995 tH(GUG)KtH(GUG)K 72 nt1.69□□□□□ -2.14
YKL222CP35995 tH(GUG)MtH(GUG)M 72 nt1.69□□□□□ -2.14
YKL222CP35995 SKI7YOR076C 2244 nt1.68□□□□□ -2.14
YKL222CP35995 YGR122C-AYGR122C-A 129 nt1.68□□□□□ -2.14
YKL222CP35995 EST2YLR318W 2655 nt1.68□□□□□ -2.14
YKL222CP35995 ROM2YLR371W 4071 nt1.67□□□□□ -2.14
YKL222CP35995 NIP1YMR309C 2439 nt1.66□□□□□ -2.14
YKL222CP35995 EST1YLR233C 2100 nt1.66□□□□□ -2.14
YKL222CP35995 RPL41AYDL184C 78 nt1.65□□□□□ -2.15
YKL222CP35995 snR14snR14 160 nt1.65□□□□□ -2.15
YKL222CP35995 VPS15YBR097W 4365 nt1.64□□□□□ -2.15
YKL222CP35995 SEC3YER008C 4011 nt1.63□□□□□ -2.15
YKL222CP35995 YNL284C-BYNL284C-B 5268 nt1.63□□□□□ -2.15
YKL222CP35995 SMC4YLR086W 4257 nt1.63□□□□□ -2.15
YKL222CP35995 MON2YNL297C 4911 nt1.63□□□□□ -2.15
YKL222CP35995 YDL159C-BYDL159C-B 177 nt1.63□□□□□ -2.15
YKL222CP35995 tV(UAC)BtV(UAC)B 74 nt1.63□□□□□ -2.15
YKL222CP35995 tV(UAC)DtV(UAC)D 74 nt1.63□□□□□ -2.15
YKL222CP35995 YML054C-AYML054C-A 159 nt1.63□□□□□ -2.15
YKL222CP35995 YBR296C-AYBR296C-A 120 nt1.61□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms