Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT20P35900 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
KRT20P35900 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT20P35900 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT20P35900 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT20P35900 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT20P35900 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT20P35900 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT20P35900 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT20P35900 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.94■□□□□ 0.62
KRT20P35900 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
KRT20P35900 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT20P35900 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KRT20P35900 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT20P35900 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KRT20P35900 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT20P35900 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT20P35900 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT20P35900 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT20P35900 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT20P35900 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT20P35900 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT20P35900 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT20P35900 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT20P35900 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT20P35900 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
KRT20P35900 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.93■□□□□ 0.62
KRT20P35900 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT20P35900 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.93■□□□□ 0.62
KRT20P35900 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.93■□□□□ 0.62
KRT20P35900 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
KRT20P35900 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT20P35900 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.93■□□□□ 0.62
KRT20P35900 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
KRT20P35900 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT20P35900 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
KRT20P35900 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
KRT20P35900 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
KRT20P35900 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT20P35900 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT20P35900 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT20P35900 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT20P35900 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
KRT20P35900 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT20P35900 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT20P35900 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.92■□□□□ 0.62
KRT20P35900 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
KRT20P35900 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.92■□□□□ 0.62
KRT20P35900 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
KRT20P35900 AC099778.1-201ENST00000568593 1911 ntBASIC18.92■□□□□ 0.62
KRT20P35900 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
KRT20P35900 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.92■□□□□ 0.62
KRT20P35900 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
KRT20P35900 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
KRT20P35900 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
KRT20P35900 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT20P35900 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT20P35900 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
KRT20P35900 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.91■□□□□ 0.62
KRT20P35900 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
KRT20P35900 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT20P35900 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT20P35900 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT20P35900 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.91■□□□□ 0.62
KRT20P35900 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
KRT20P35900 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
KRT20P35900 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
KRT20P35900 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
KRT20P35900 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
KRT20P35900 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT20P35900 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT20P35900 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT20P35900 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT20P35900 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT20P35900 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.9■□□□□ 0.62
KRT20P35900 AF201337.1-201ENST00000520239 748 ntBASIC18.9■□□□□ 0.62
KRT20P35900 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KRT20P35900 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT20P35900 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
KRT20P35900 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
KRT20P35900 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.9■□□□□ 0.62
KRT20P35900 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT20P35900 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.9■□□□□ 0.62
KRT20P35900 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
KRT20P35900 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT20P35900 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT20P35900 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms