Protein–RNA interactions for Protein: P25040

TSR4, 20S rRNA accumulation protein 4, yeastyeast

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TSR4P25040 LAA1YJL207C 6045 nt1.43□□□□□ -2.18
TSR4P25040 YDR524C-AYDR524C-A 120 nt1.43□□□□□ -2.18
TSR4P25040 YBR178WYBR178W 375 nt1.43□□□□□ -2.18
TSR4P25040 SMC1YFL008W 3678 nt1.43□□□□□ -2.18
TSR4P25040 BFR2YDR299W 1605 nt1.43□□□□□ -2.18
TSR4P25040 PIK1YNL267W 3201 nt1.41□□□□□ -2.18
TSR4P25040 YGL182CYGL182C 324 nt1.41□□□□□ -2.18
TSR4P25040 YNL103W-AYNL103W-A 90 nt1.41□□□□□ -2.18
TSR4P25040 MSH3YCR092C 3057 nt1.41□□□□□ -2.18
TSR4P25040 YBL039C-AYBL039C-A 84 nt1.4□□□□□ -2.19
TSR4P25040 snR39BsnR39B 96 nt1.4□□□□□ -2.19
TSR4P25040 NOP9YJL010C 2001 nt1.4□□□□□ -2.19
TSR4P25040 COG6YNL041C 2520 nt1.39□□□□□ -2.19
TSR4P25040 YLR282CYLR282C 342 nt1.37□□□□□ -2.19
TSR4P25040 CMC4YMR194C-B 222 nt1.37□□□□□ -2.19
TSR4P25040 BUD3YCL014W 4911 nt1.37□□□□□ -2.19
TSR4P25040 YCR095W-AYCR095W-A 159 nt1.36□□□□□ -2.19
TSR4P25040 OST4YDL232W 111 nt1.36□□□□□ -2.19
TSR4P25040 TFB5YDR079C-A 219 nt1.36□□□□□ -2.19
TSR4P25040 PMP2YEL017C-A 132 nt1.36□□□□□ -2.19
TSR4P25040 YHR131W-AYHR131W-A 246 nt1.36□□□□□ -2.19
TSR4P25040 PRP16YKR086W 3216 nt1.35□□□□□ -2.19
TSR4P25040 TAH1YCR060W 336 nt1.35□□□□□ -2.19
TSR4P25040 GEA2YEL022W 4380 nt1.34□□□□□ -2.19
TSR4P25040 CHS6YJL099W 2241 nt1.34□□□□□ -2.19
TSR4P25040 RPL26BYGR034W 384 nt1.34□□□□□ -2.19
TSR4P25040 YBR099CYBR099C 384 nt1.34□□□□□ -2.19
TSR4P25040 RCO1YMR075W 2055 nt1.34□□□□□ -2.19
TSR4P25040 YDR544CYDR544C 429 nt1.33□□□□□ -2.2
TSR4P25040 COX5BYIL111W 456 nt1.33□□□□□ -2.2
TSR4P25040 QCR9YGR183C 201 nt1.32□□□□□ -2.2
TSR4P25040 HUG1YML058W-A 207 nt1.32□□□□□ -2.2
TSR4P25040 YNL284C-BYNL284C-B 5268 nt1.32□□□□□ -2.2
TSR4P25040 SCC2YDR180W 4482 nt1.32□□□□□ -2.2
TSR4P25040 LTE1YAL024C 4308 nt1.31□□□□□ -2.2
TSR4P25040 YLR041WYLR041W 321 nt1.31□□□□□ -2.2
TSR4P25040 YNL067W-BYNL067W-B 141 nt1.31□□□□□ -2.2
TSR4P25040 STF2YGR008C 255 nt1.3□□□□□ -2.2
TSR4P25040 YSP1YHR155W 3687 nt1.29□□□□□ -2.2
TSR4P25040 FYV10YIL097W 1551 nt1.29□□□□□ -2.2
TSR4P25040 snR190snR190 190 nt1.28□□□□□ -2.2
TSR4P25040 SOM1YEL059C-A 225 nt1.27□□□□□ -2.21
TSR4P25040 tH(GUG)E1tH(GUG)E1 72 nt1.27□□□□□ -2.21
TSR4P25040 tH(GUG)E2tH(GUG)E2 72 nt1.27□□□□□ -2.21
TSR4P25040 tH(GUG)G1tH(GUG)G1 72 nt1.27□□□□□ -2.21
TSR4P25040 tH(GUG)G2tH(GUG)G2 72 nt1.27□□□□□ -2.21
TSR4P25040 tH(GUG)HtH(GUG)H 72 nt1.27□□□□□ -2.21
TSR4P25040 tH(GUG)KtH(GUG)K 72 nt1.27□□□□□ -2.21
TSR4P25040 tH(GUG)MtH(GUG)M 72 nt1.27□□□□□ -2.21
TSR4P25040 UTP8YGR128C 2142 nt1.27□□□□□ -2.21
TSR4P25040 YML002WYML002W 2214 nt1.26□□□□□ -2.21
TSR4P25040 SEC8YPR055W 3198 nt1.25□□□□□ -2.21
TSR4P25040 YGR130CYGR130C 2451 nt1.25□□□□□ -2.21
TSR4P25040 YDL073WYDL073W 2955 nt1.25□□□□□ -2.21
TSR4P25040 YMR326CYMR326C 309 nt1.25□□□□□ -2.21
TSR4P25040 YDR210WYDR210W 228 nt1.23□□□□□ -2.21
TSR4P25040 YKL100W-AYKL100W-A 90 nt1.23□□□□□ -2.21
TSR4P25040 snR61snR61 90 nt1.22□□□□□ -2.21
TSR4P25040 SEC1YDR164C 2175 nt1.21□□□□□ -2.22
TSR4P25040 tN(GUU)QtN(GUU)Q 71 nt1.2□□□□□ -2.22
TSR4P25040 YHR217CYHR217C 462 nt1.2□□□□□ -2.22
TSR4P25040 YLR232WYLR232W 348 nt1.19□□□□□ -2.22
TSR4P25040 YLR399W-AYLR399W-A 105 nt1.19□□□□□ -2.22
TSR4P25040 IML1YJR138W 4755 nt1.18□□□□□ -2.22
TSR4P25040 VAM6YDL077C 3150 nt1.17□□□□□ -2.22
TSR4P25040 YPR117WYPR117W 7470 nt1.17□□□□□ -2.22
TSR4P25040 YGL041C-BYGL041C-B 183 nt1.15□□□□□ -2.23
TSR4P25040 SIP4YJL089W 2490 nt1.15□□□□□ -2.23
TSR4P25040 BEM3YPL115C 3387 nt1.15□□□□□ -2.23
TSR4P25040 tM(CAU)Q2tM(CAU)Q2 78 nt1.14□□□□□ -2.23
TSR4P25040 YPR160W-AYPR160W-A 81 nt1.14□□□□□ -2.23
TSR4P25040 YJR029WYJR029W 5268 nt1.14□□□□□ -2.23
TSR4P25040 YPR137C-BYPR137C-B 5268 nt1.14□□□□□ -2.23
TSR4P25040 BEM2YER155C 6504 nt1.13□□□□□ -2.23
TSR4P25040 SPT7YBR081C 3999 nt1.13□□□□□ -2.23
TSR4P25040 EMT1tM(CAU)D 73 nt1.13□□□□□ -2.23
TSR4P25040 EMT5tM(CAU)J1 73 nt1.13□□□□□ -2.23
TSR4P25040 EMT3tM(CAU)J2 73 nt1.13□□□□□ -2.23
TSR4P25040 EMT4tM(CAU)M 73 nt1.13□□□□□ -2.23
TSR4P25040 EMT2tM(CAU)O2 73 nt1.13□□□□□ -2.23
TSR4P25040 IQG1YPL242C 4488 nt1.11□□□□□ -2.23
TSR4P25040 RPM2YML091C 3609 nt1.1□□□□□ -2.23
TSR4P25040 YJL127W-AYJL127W-A 117 nt1.1□□□□□ -2.23
TSR4P25040 RKR1YMR247C 4689 nt1.1□□□□□ -2.23
TSR4P25040 BIR1YJR089W 2865 nt1.1□□□□□ -2.23
TSR4P25040 YNL054W-BYNL054W-B 5250 nt1.09□□□□□ -2.23
TSR4P25040 tV(UAC)BtV(UAC)B 74 nt1.09□□□□□ -2.23
TSR4P25040 tV(UAC)DtV(UAC)D 74 nt1.09□□□□□ -2.23
TSR4P25040 NNF2YGR089W 2811 nt1.09□□□□□ -2.24
TSR4P25040 YPL060C-AYPL060C-A 3315 nt1.08□□□□□ -2.24
TSR4P25040 SBH1YER087C-B 249 nt1.07□□□□□ -2.24
TSR4P25040 snR81snR81 201 nt1.06□□□□□ -2.24
TSR4P25040 DOP1YDR141C 5097 nt1.06□□□□□ -2.24
TSR4P25040 YGR146C-AYGR146C-A 162 nt1.05□□□□□ -2.24
TSR4P25040 YNL266WYNL266W 420 nt1.04□□□□□ -2.24
TSR4P25040 YBR072C-AYBR072C-A 162 nt1.04□□□□□ -2.24
TSR4P25040 PAU12YGR294W 363 nt1.03□□□□□ -2.24
TSR4P25040 PAU24YBR301W 363 nt1.03□□□□□ -2.24
TSR4P25040 tS(GCU)Q1tS(GCU)Q1 86 nt1.02□□□□□ -2.25
TSR4P25040 ULP2YIL031W 3105 nt1.01□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms