Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP24386 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP24386 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP24386 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP24386 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP24386 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP24386 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP24386 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP24386 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP24386 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP24386 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHMP24386 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP24386 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.63■□□□□ 0.57
CHMP24386 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.63■□□□□ 0.57
CHMP24386 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.63■□□□□ 0.57
CHMP24386 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.63■□□□□ 0.57
CHMP24386 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP24386 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP24386 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CHMP24386 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP24386 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP24386 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP24386 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP24386 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHMP24386 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP24386 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CHMP24386 AC073210.2-201ENST00000430369 194 ntBASIC18.62■□□□□ 0.57
CHMP24386 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP24386 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.62■□□□□ 0.57
CHMP24386 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.62■□□□□ 0.57
CHMP24386 MIR4758-201ENST00000577688 71 ntBASIC18.62■□□□□ 0.57
CHMP24386 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.62■□□□□ 0.57
CHMP24386 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP24386 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP24386 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP24386 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHMP24386 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP24386 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP24386 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP24386 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.61■□□□□ 0.57
CHMP24386 AC116562.4-201ENST00000641316 2276 ntBASIC18.61■□□□□ 0.57
CHMP24386 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP24386 BX323043.1-201ENST00000641006 1765 ntBASIC18.61■□□□□ 0.57
CHMP24386 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP24386 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP24386 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.61■□□□□ 0.57
CHMP24386 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP24386 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP24386 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP24386 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP24386 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP24386 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP24386 MIPEPP3-201ENST00000412105 444 ntBASIC18.61■□□□□ 0.57
CHMP24386 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP24386 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP24386 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.61■□□□□ 0.57
CHMP24386 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.61■□□□□ 0.57
CHMP24386 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP24386 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP24386 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP24386 AC133041.1-202ENST00000642053 222 ntBASIC18.61■□□□□ 0.57
CHMP24386 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.61■□□□□ 0.57
CHMP24386 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.61■□□□□ 0.57
CHMP24386 AC125437.2-201ENST00000625180 2167 ntBASIC18.61■□□□□ 0.57
CHMP24386 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP24386 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.61■□□□□ 0.57
CHMP24386 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.61■□□□□ 0.57
CHMP24386 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHMP24386 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CHMP24386 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 AL020996.1-203ENST00000536896 2307 ntBASIC18.6■□□□□ 0.57
CHMP24386 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.6■□□□□ 0.57
CHMP24386 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.6■□□□□ 0.57
CHMP24386 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CHMP24386 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.6■□□□□ 0.57
CHMP24386 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms