Protein–RNA interactions for Protein: P24276

SSD1, Protein SSD1, yeastyeast

Known RBP RIP-Chip data

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSD1P24276 YGR130CYGR130C 2451 nt1.4□□□□□ -2.19
SSD1P24276 YPR117WYPR117W 7470 nt1.4□□□□□ -2.19
SSD1P24276 ASE1YOR058C 2658 nt1.4□□□□□ -2.19
SSD1P24276 PRP5YBR237W 2550 nt1.39□□□□□ -2.19
SSD1P24276 BFR2YDR299W 1605 nt1.37□□□□□ -2.19
SSD1P24276 YLR282CYLR282C 342 nt1.37□□□□□ -2.19
SSD1P24276 COX5BYIL111W 456 nt1.36□□□□□ -2.19
SSD1P24276 YOR102WYOR102W 351 nt1.36□□□□□ -2.19
SSD1P24276 YHL015W-AYHL015W-A 84 nt1.34□□□□□ -2.19
SSD1P24276 tL(UAA)QtL(UAA)Q 85 nt1.33□□□□□ -2.2
SSD1P24276 SEC8YPR055W 3198 nt1.33□□□□□ -2.2
SSD1P24276 snR48snR48 113 nt1.32□□□□□ -2.2
SSD1P24276 YML002WYML002W 2214 nt1.31□□□□□ -2.2
SSD1P24276 YGL182CYGL182C 324 nt1.31□□□□□ -2.2
SSD1P24276 YBL039C-AYBL039C-A 84 nt1.31□□□□□ -2.2
SSD1P24276 snR190snR190 190 nt1.31□□□□□ -2.2
SSD1P24276 PRP16YKR086W 3216 nt1.31□□□□□ -2.2
SSD1P24276 SNU13YEL026W 381 nt1.3□□□□□ -2.2
SSD1P24276 UTP8YGR128C 2142 nt1.29□□□□□ -2.2
SSD1P24276 tV(UAC)BtV(UAC)B 74 nt1.29□□□□□ -2.2
SSD1P24276 tV(UAC)DtV(UAC)D 74 nt1.29□□□□□ -2.2
SSD1P24276 YLR041WYLR041W 321 nt1.29□□□□□ -2.2
SSD1P24276 YOR314W-AYOR314W-A 111 nt1.28□□□□□ -2.2
SSD1P24276 FYV10YIL097W 1551 nt1.28□□□□□ -2.2
SSD1P24276 IML1YJR138W 4755 nt1.27□□□□□ -2.21
SSD1P24276 TAH1YCR060W 336 nt1.27□□□□□ -2.21 RIP-Chip
SSD1P24276 YLR399W-AYLR399W-A 105 nt1.27□□□□□ -2.21
SSD1P24276 Q0143Q0143 153 nt1.26□□□□□ -2.21
SSD1P24276 SIP4YJL089W 2490 nt1.26□□□□□ -2.21
SSD1P24276 UBP3YER151C 2739 nt1.24□□□□□ -2.21
SSD1P24276 YNL284C-BYNL284C-B 5268 nt1.23□□□□□ -2.21
SSD1P24276 YOR329W-AYOR329W-A 210 nt1.23□□□□□ -2.21
SSD1P24276 RPM2YML091C 3609 nt1.23□□□□□ -2.21
SSD1P24276 SCC2YDR180W 4482 nt1.22□□□□□ -2.21
SSD1P24276 CHS6YJL099W 2241 nt1.22□□□□□ -2.21
SSD1P24276 YCL001W-BYCL001W-B 255 nt1.22□□□□□ -2.21
SSD1P24276 YPR160W-AYPR160W-A 81 nt1.21□□□□□ -2.22
SSD1P24276 BUD3YCL014W 4911 nt1.21□□□□□ -2.22
SSD1P24276 snR39BsnR39B 96 nt1.2□□□□□ -2.22
SSD1P24276 YDR544CYDR544C 429 nt1.19□□□□□ -2.22
SSD1P24276 tN(GUU)QtN(GUU)Q 71 nt1.18□□□□□ -2.22
SSD1P24276 MYO1YHR023W 5787 nt1.18□□□□□ -2.22
SSD1P24276 LTE1YAL024C 4308 nt1.16□□□□□ -2.22
SSD1P24276 YIL071W-AYIL071W-A 477 nt1.16□□□□□ -2.22
SSD1P24276 YLR232WYLR232W 348 nt1.16□□□□□ -2.22
SSD1P24276 QCR9YGR183C 201 nt1.15□□□□□ -2.23
SSD1P24276 SPT7YBR081C 3999 nt1.14□□□□□ -2.23
SSD1P24276 STF2YGR008C 255 nt1.13□□□□□ -2.23
SSD1P24276 YHR131W-AYHR131W-A 246 nt1.13□□□□□ -2.23
SSD1P24276 HUG1YML058W-A 207 nt1.13□□□□□ -2.23
SSD1P24276 YNL067W-BYNL067W-B 141 nt1.13□□□□□ -2.23
SSD1P24276 YNL205CYNL205C 423 nt1.13□□□□□ -2.23
SSD1P24276 YSP1YHR155W 3687 nt1.12□□□□□ -2.23
SSD1P24276 RKR1YMR247C 4689 nt1.11□□□□□ -2.23
SSD1P24276 OST4YDL232W 111 nt1.1□□□□□ -2.23
SSD1P24276 YDL073WYDL073W 2955 nt1.09□□□□□ -2.23
SSD1P24276 snR85snR85 171 nt1.09□□□□□ -2.23
SSD1P24276 YJR029WYJR029W 5268 nt1.09□□□□□ -2.24
SSD1P24276 YPR137C-BYPR137C-B 5268 nt1.09□□□□□ -2.24
SSD1P24276 COG6YNL041C 2520 nt1.08□□□□□ -2.24
SSD1P24276 YDR210WYDR210W 228 nt1.07□□□□□ -2.24
SSD1P24276 EMT1tM(CAU)D 73 nt1.07□□□□□ -2.24
SSD1P24276 EMT5tM(CAU)J1 73 nt1.07□□□□□ -2.24
SSD1P24276 EMT3tM(CAU)J2 73 nt1.07□□□□□ -2.24
SSD1P24276 EMT4tM(CAU)M 73 nt1.07□□□□□ -2.24
SSD1P24276 EMT2tM(CAU)O2 73 nt1.07□□□□□ -2.24
SSD1P24276 SEC1YDR164C 2175 nt1.07□□□□□ -2.24
SSD1P24276 BEM3YPL115C 3387 nt1.06□□□□□ -2.24
SSD1P24276 tM(CAU)Q2tM(CAU)Q2 78 nt1.05□□□□□ -2.24
SSD1P24276 YCR095W-AYCR095W-A 159 nt1.04□□□□□ -2.24
SSD1P24276 SOM1YEL059C-A 225 nt1.04□□□□□ -2.24
SSD1P24276 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
SSD1P24276 YBR099CYBR099C 384 nt1.02□□□□□ -2.25
SSD1P24276 YJL127W-AYJL127W-A 117 nt0.98□□□□□ -2.25
SSD1P24276 BEM2YER155C 6504 nt0.98□□□□□ -2.25
SSD1P24276 ULP2YIL031W 3105 nt0.95□□□□□ -2.26
SSD1P24276 YBR072C-AYBR072C-A 162 nt0.95□□□□□ -2.26
SSD1P24276 PAU24YBR301W 363 nt0.95□□□□□ -2.26
SSD1P24276 RCO1YMR075W 2055 nt0.95□□□□□ -2.26
SSD1P24276 PMP2YEL017C-A 132 nt0.94□□□□□ -2.26
SSD1P24276 YGR146C-AYGR146C-A 162 nt0.94□□□□□ -2.26
SSD1P24276 YNL103W-AYNL103W-A 90 nt0.94□□□□□ -2.26
SSD1P24276 DOP1YDR141C 5097 nt0.92□□□□□ -2.26
SSD1P24276 NNF2YGR089W 2811 nt0.92□□□□□ -2.26
SSD1P24276 GLG1YKR058W 1851 nt0.91□□□□□ -2.26
SSD1P24276 YOR192C-BYOR192C-B 5313 nt0.91□□□□□ -2.26
SSD1P24276 UTP20YBL004W 7482 nt0.91□□□□□ -2.26
SSD1P24276 YPR159C-AYPR159C-A 102 nt0.9□□□□□ -2.27
SSD1P24276 IQG1YPL242C 4488 nt0.9□□□□□ -2.27
SSD1P24276 BIR1YJR089W 2865 nt0.89□□□□□ -2.27
SSD1P24276 MLP1YKR095W 5628 nt0.89□□□□□ -2.27
SSD1P24276 YLL006W-AYLL006W-A 177 nt0.88□□□□□ -2.27
SSD1P24276 YIL142C-AYIL142C-A 333 nt0.86□□□□□ -2.27
SSD1P24276 BUL2YML111W 2763 nt0.85□□□□□ -2.27
SSD1P24276 TFB5YDR079C-A 219 nt0.84□□□□□ -2.27
SSD1P24276 PET111YMR257C 2403 nt0.84□□□□□ -2.28
SSD1P24276 YNL266WYNL266W 420 nt0.82□□□□□ -2.28
SSD1P24276 YBL109WYBL109W 336 nt0.81□□□□□ -2.28
SSD1P24276 YBR178WYBR178W 375 nt0.8□□□□□ -2.28
SSD1P24276 NIP1YMR309C 2439 nt0.79□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 62.4 ms