Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOBP13765 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DOBP13765 TSPY6P-201ENST00000448518 926 ntBASIC17.92■□□□□ 0.46
HLA-DOBP13765 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.92■□□□□ 0.46
HLA-DOBP13765 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.92■□□□□ 0.46
HLA-DOBP13765 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DOBP13765 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.92■□□□□ 0.46
HLA-DOBP13765 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DOBP13765 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.92■□□□□ 0.46
HLA-DOBP13765 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOBP13765 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOBP13765 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOBP13765 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DOBP13765 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HLA-DOBP13765 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.92■□□□□ 0.46
HLA-DOBP13765 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DOBP13765 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.91■□□□□ 0.46
HLA-DOBP13765 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HLA-DOBP13765 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
HLA-DOBP13765 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DOBP13765 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.91■□□□□ 0.46
HLA-DOBP13765 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HLA-DOBP13765 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HLA-DOBP13765 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HLA-DOBP13765 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DOBP13765 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.9■□□□□ 0.46
HLA-DOBP13765 KRT8P17-201ENST00000453110 1448 ntBASIC17.9■□□□□ 0.46
HLA-DOBP13765 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DOBP13765 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HLA-DOBP13765 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DOBP13765 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DOBP13765 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DOBP13765 SLC29A4P1-201ENST00000398760 971 ntBASIC17.9■□□□□ 0.46
HLA-DOBP13765 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.9■□□□□ 0.46
HLA-DOBP13765 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DOBP13765 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.9■□□□□ 0.46
HLA-DOBP13765 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DOBP13765 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HLA-DOBP13765 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
HLA-DOBP13765 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HLA-DOBP13765 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DOBP13765 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DOBP13765 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.89■□□□□ 0.45
HLA-DOBP13765 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DOBP13765 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DOBP13765 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DOBP13765 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DOBP13765 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HLA-DOBP13765 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
HLA-DOBP13765 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DOBP13765 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.89■□□□□ 0.45
HLA-DOBP13765 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.89■□□□□ 0.45
HLA-DOBP13765 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-DOBP13765 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
HLA-DOBP13765 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
HLA-DOBP13765 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HLA-DOBP13765 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DOBP13765 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.89■□□□□ 0.45
HLA-DOBP13765 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DOBP13765 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DOBP13765 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
HLA-DOBP13765 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DOBP13765 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HLA-DOBP13765 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.89■□□□□ 0.45
HLA-DOBP13765 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HLA-DOBP13765 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DOBP13765 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DOBP13765 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DOBP13765 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DOBP13765 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DOBP13765 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DOBP13765 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DOBP13765 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DOBP13765 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DOBP13765 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DOBP13765 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DOBP13765 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HLA-DOBP13765 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
HLA-DOBP13765 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DOBP13765 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.88■□□□□ 0.45
HLA-DOBP13765 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DOBP13765 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.88■□□□□ 0.45
HLA-DOBP13765 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
HLA-DOBP13765 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.88■□□□□ 0.45
HLA-DOBP13765 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HLA-DOBP13765 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms