Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DEFA4P12838 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DEFA4P12838 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DEFA4P12838 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
DEFA4P12838 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
DEFA4P12838 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DEFA4P12838 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DEFA4P12838 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.2■□□□□ 0.18
DEFA4P12838 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DEFA4P12838 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.2■□□□□ 0.18
DEFA4P12838 NTF6G-201ENST00000591094 616 ntBASIC16.2■□□□□ 0.18
DEFA4P12838 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
DEFA4P12838 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
DEFA4P12838 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DEFA4P12838 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DEFA4P12838 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DEFA4P12838 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.2■□□□□ 0.18
DEFA4P12838 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.2■□□□□ 0.18
DEFA4P12838 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.19■□□□□ 0.18
DEFA4P12838 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
DEFA4P12838 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.19■□□□□ 0.18
DEFA4P12838 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.19■□□□□ 0.18
DEFA4P12838 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.19■□□□□ 0.18
DEFA4P12838 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.19■□□□□ 0.18
DEFA4P12838 AC097381.1-201ENST00000429019 1296 ntBASIC16.19■□□□□ 0.18
DEFA4P12838 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.19■□□□□ 0.18
DEFA4P12838 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.19■□□□□ 0.18
DEFA4P12838 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.19■□□□□ 0.18
DEFA4P12838 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
DEFA4P12838 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.19■□□□□ 0.18
DEFA4P12838 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 AC098818.2-201ENST00000564925 2320 ntBASIC16.19■□□□□ 0.18
DEFA4P12838 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.19■□□□□ 0.18
DEFA4P12838 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.19■□□□□ 0.18
DEFA4P12838 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
DEFA4P12838 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
DEFA4P12838 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.18■□□□□ 0.18
DEFA4P12838 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
DEFA4P12838 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DEFA4P12838 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DEFA4P12838 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.18■□□□□ 0.18
DEFA4P12838 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DEFA4P12838 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
DEFA4P12838 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DEFA4P12838 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
DEFA4P12838 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
DEFA4P12838 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
DEFA4P12838 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.18■□□□□ 0.18
DEFA4P12838 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.18■□□□□ 0.18
DEFA4P12838 SLC7A5P1-201ENST00000568957 537 ntBASIC16.18■□□□□ 0.18
DEFA4P12838 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.18■□□□□ 0.18
DEFA4P12838 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
DEFA4P12838 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
DEFA4P12838 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DEFA4P12838 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DEFA4P12838 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
DEFA4P12838 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.18■□□□□ 0.18
DEFA4P12838 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
DEFA4P12838 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DEFA4P12838 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DEFA4P12838 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.18■□□□□ 0.18
DEFA4P12838 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
DEFA4P12838 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
DEFA4P12838 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.18■□□□□ 0.18
DEFA4P12838 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.17■□□□□ 0.18
DEFA4P12838 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.17■□□□□ 0.18
DEFA4P12838 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.17■□□□□ 0.18
DEFA4P12838 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.17■□□□□ 0.18
DEFA4P12838 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.17■□□□□ 0.18
DEFA4P12838 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.17■□□□□ 0.18
DEFA4P12838 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.17■□□□□ 0.18
DEFA4P12838 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
DEFA4P12838 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
DEFA4P12838 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.17■□□□□ 0.18
DEFA4P12838 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
DEFA4P12838 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
DEFA4P12838 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DEFA4P12838 SMG8-203ENST00000578922 2178 ntBASIC16.17■□□□□ 0.18
DEFA4P12838 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms