Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 AC073130.3-201ENST00000624389 2278 ntBASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAB40ALP0C0E4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 HLA-G-202ENST00000376815 851 ntBASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 HLA-G-203ENST00000376818 1127 ntBASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 AL121906.2-201ENST00000621597 723 ntBASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAB40ALP0C0E4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
RAB40ALP0C0E4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAB40ALP0C0E4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RAB40ALP0C0E4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB40ALP0C0E4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB40ALP0C0E4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RAB40ALP0C0E4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 MIR4785-201ENST00000585005 73 ntBASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RAB40ALP0C0E4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 TSPY7P-201ENST00000431358 1114 ntBASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RAB40ALP0C0E4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms