Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HOXC6P09630 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.7■■□□□ 1.22
HOXC6P09630 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HOXC6P09630 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.7■■□□□ 1.22
HOXC6P09630 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
HOXC6P09630 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
HOXC6P09630 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.69■■□□□ 1.22
HOXC6P09630 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HOXC6P09630 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.69■■□□□ 1.22
HOXC6P09630 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.69■■□□□ 1.22
HOXC6P09630 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HOXC6P09630 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HOXC6P09630 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
HOXC6P09630 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.69■■□□□ 1.22
HOXC6P09630 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC22.69■■□□□ 1.22
HOXC6P09630 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.69■■□□□ 1.22
HOXC6P09630 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.69■■□□□ 1.22
HOXC6P09630 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
HOXC6P09630 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.69■■□□□ 1.22
HOXC6P09630 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.69■■□□□ 1.22
HOXC6P09630 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HOXC6P09630 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
HOXC6P09630 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.69■■□□□ 1.22
HOXC6P09630 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HOXC6P09630 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HOXC6P09630 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.68■■□□□ 1.22
HOXC6P09630 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.68■■□□□ 1.22
HOXC6P09630 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
HOXC6P09630 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HOXC6P09630 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
HOXC6P09630 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC22.68■■□□□ 1.22
HOXC6P09630 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.68■■□□□ 1.22
HOXC6P09630 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.68■■□□□ 1.22
HOXC6P09630 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
HOXC6P09630 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
HOXC6P09630 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.68■■□□□ 1.22
HOXC6P09630 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.68■■□□□ 1.22
HOXC6P09630 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HOXC6P09630 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HOXC6P09630 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.68■■□□□ 1.22
HOXC6P09630 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
HOXC6P09630 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
HOXC6P09630 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HOXC6P09630 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HOXC6P09630 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HOXC6P09630 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
HOXC6P09630 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.67■■□□□ 1.22
HOXC6P09630 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HOXC6P09630 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.67■■□□□ 1.22
HOXC6P09630 KRT18P57-201ENST00000443599 1254 ntBASIC22.67■■□□□ 1.22
HOXC6P09630 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HOXC6P09630 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HOXC6P09630 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.67■■□□□ 1.22
HOXC6P09630 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC22.67■■□□□ 1.22
HOXC6P09630 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.67■■□□□ 1.22
HOXC6P09630 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
HOXC6P09630 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
HOXC6P09630 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HOXC6P09630 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.67■■□□□ 1.22
HOXC6P09630 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.67■■□□□ 1.22
HOXC6P09630 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.67■■□□□ 1.22
HOXC6P09630 Z98882.1-201ENST00000622160 2253 ntBASIC22.66■■□□□ 1.22
HOXC6P09630 KRT8P20-201ENST00000423953 1409 ntBASIC22.66■■□□□ 1.22
HOXC6P09630 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.66■■□□□ 1.22
HOXC6P09630 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.66■■□□□ 1.22
HOXC6P09630 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.66■■□□□ 1.22
HOXC6P09630 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HOXC6P09630 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HOXC6P09630 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.66■■□□□ 1.22
HOXC6P09630 AL137013.1-201ENST00000432946 1228 ntBASIC22.66■■□□□ 1.22
HOXC6P09630 SLC25A3P1-201ENST00000443844 931 ntBASIC22.66■■□□□ 1.22
HOXC6P09630 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.66■■□□□ 1.22
HOXC6P09630 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.66■■□□□ 1.22
HOXC6P09630 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
HOXC6P09630 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HOXC6P09630 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
HOXC6P09630 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HOXC6P09630 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HOXC6P09630 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HOXC6P09630 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HOXC6P09630 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
HOXC6P09630 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.65■■□□□ 1.22
HOXC6P09630 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.65■■□□□ 1.22
HOXC6P09630 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
HOXC6P09630 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
HOXC6P09630 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HOXC6P09630 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HOXC6P09630 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HOXC6P09630 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HOXC6P09630 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
HOXC6P09630 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
HOXC6P09630 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
HOXC6P09630 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
HOXC6P09630 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
HOXC6P09630 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HOXC6P09630 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.64■■□□□ 1.21
HOXC6P09630 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.64■■□□□ 1.21
HOXC6P09630 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.64■■□□□ 1.21
HOXC6P09630 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HOXC6P09630 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms