Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 METTL23-204ENST00000586752 904 ntTSL 2 BASIC26.52■■□□□ 1.84
COL5A2P05997 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC26.52■■□□□ 1.84
COL5A2P05997 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
COL5A2P05997 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL5A2P05997 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.84
COL5A2P05997 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
COL5A2P05997 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
COL5A2P05997 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
COL5A2P05997 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
COL5A2P05997 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL5A2P05997 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL5A2P05997 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL5A2P05997 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.51■■□□□ 1.83
COL5A2P05997 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC26.5■■□□□ 1.83
COL5A2P05997 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC26.5■■□□□ 1.83
COL5A2P05997 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL5A2P05997 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL5A2P05997 H19-201ENST00000411754 1788 ntTSL 5 BASIC26.5■■□□□ 1.83
COL5A2P05997 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
COL5A2P05997 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
COL5A2P05997 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL5A2P05997 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
COL5A2P05997 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL5A2P05997 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL5A2P05997 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL5A2P05997 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC26.49■■□□□ 1.83
COL5A2P05997 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC26.49■■□□□ 1.83
COL5A2P05997 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL5A2P05997 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC26.49■■□□□ 1.83
COL5A2P05997 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC26.49■■□□□ 1.83
COL5A2P05997 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL5A2P05997 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL5A2P05997 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
COL5A2P05997 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL5A2P05997 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL5A2P05997 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL5A2P05997 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL5A2P05997 CRYGFP-201ENST00000418459 633 ntBASIC26.49■■□□□ 1.83
COL5A2P05997 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC26.49■■□□□ 1.83
COL5A2P05997 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC26.49■■□□□ 1.83
COL5A2P05997 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.48■■□□□ 1.83
COL5A2P05997 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.48■■□□□ 1.83
COL5A2P05997 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.48■■□□□ 1.83
COL5A2P05997 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
COL5A2P05997 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL5A2P05997 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL5A2P05997 FAM8A6P-201ENST00000407496 1135 ntBASIC26.48■■□□□ 1.83
COL5A2P05997 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC26.48■■□□□ 1.83
COL5A2P05997 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL5A2P05997 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL5A2P05997 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.48■■□□□ 1.83
COL5A2P05997 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL5A2P05997 ECEL1P1-201ENST00000373592 1742 ntBASIC26.48■■□□□ 1.83
COL5A2P05997 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL5A2P05997 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL5A2P05997 AP006587.1-201ENST00000534129 1502 ntBASIC26.47■■□□□ 1.83
COL5A2P05997 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL5A2P05997 AC244015.2-201ENST00000616358 1861 ntBASIC26.47■■□□□ 1.83
COL5A2P05997 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL5A2P05997 YBX1P10-201ENST00000444752 975 ntBASIC26.47■■□□□ 1.83
COL5A2P05997 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC26.47■■□□□ 1.83
COL5A2P05997 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL5A2P05997 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC26.47■■□□□ 1.83
COL5A2P05997 AC128688.1-201ENST00000487626 519 ntBASIC26.47■■□□□ 1.83
COL5A2P05997 FDX2-206ENST00000492239 773 ntTSL 2 BASIC26.47■■□□□ 1.83
COL5A2P05997 AC097488.1-201ENST00000507834 756 ntBASIC26.47■■□□□ 1.83
COL5A2P05997 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL5A2P05997 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL5A2P05997 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL5A2P05997 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL5A2P05997 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL5A2P05997 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
COL5A2P05997 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.46■■□□□ 1.83
COL5A2P05997 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.46■■□□□ 1.83
COL5A2P05997 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
COL5A2P05997 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC26.46■■□□□ 1.83
COL5A2P05997 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
COL5A2P05997 AC091076.1-201ENST00000610741 619 ntBASIC26.46■■□□□ 1.83
COL5A2P05997 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL5A2P05997 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC26.46■■□□□ 1.83
COL5A2P05997 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL5A2P05997 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC26.46■■□□□ 1.83
COL5A2P05997 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
COL5A2P05997 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
COL5A2P05997 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
COL5A2P05997 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL5A2P05997 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC26.45■■□□□ 1.82
COL5A2P05997 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC26.45■■□□□ 1.82
COL5A2P05997 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC26.45■■□□□ 1.82
COL5A2P05997 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC26.45■■□□□ 1.82
COL5A2P05997 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL5A2P05997 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC26.45■■□□□ 1.82
COL5A2P05997 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
COL5A2P05997 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC26.45■■□□□ 1.82
COL5A2P05997 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC26.45■■□□□ 1.82
COL5A2P05997 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC26.45■■□□□ 1.82
COL5A2P05997 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC26.45■■□□□ 1.82
COL5A2P05997 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
COL5A2P05997 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL5A2P05997 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms