Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRAP04437 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRAP04437 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.19■□□□□ 0.02
TCRAP04437 EDA-201ENST00000338901 1233 ntBASIC15.19■□□□□ 0.02
TCRAP04437 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.19■□□□□ 0.02
TCRAP04437 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TCRAP04437 AL355001.2-201ENST00000620617 1191 ntBASIC15.19■□□□□ 0.02
TCRAP04437 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRAP04437 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRAP04437 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TCRAP04437 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TCRAP04437 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRAP04437 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRAP04437 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRAP04437 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TCRAP04437 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TCRAP04437 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRAP04437 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.18■□□□□ 0.02
TCRAP04437 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRAP04437 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TCRAP04437 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.18■□□□□ 0.02
TCRAP04437 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRAP04437 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRAP04437 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.18■□□□□ 0.02
TCRAP04437 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.18■□□□□ 0.02
TCRAP04437 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TCRAP04437 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TCRAP04437 AC007322.3-201ENST00000426526 701 ntBASIC15.18■□□□□ 0.02
TCRAP04437 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.18■□□□□ 0.02
TCRAP04437 PBX2P1-201ENST00000493219 1291 ntBASIC15.18■□□□□ 0.02
TCRAP04437 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.18■□□□□ 0.02
TCRAP04437 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.18■□□□□ 0.02
TCRAP04437 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TCRAP04437 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRAP04437 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TCRAP04437 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.18■□□□□ 0.02
TCRAP04437 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRAP04437 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.18■□□□□ 0.02
TCRAP04437 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRAP04437 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.18■□□□□ 0.02
TCRAP04437 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRAP04437 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TCRAP04437 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRAP04437 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
TCRAP04437 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRAP04437 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.18■□□□□ 0.02
TCRAP04437 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.18■□□□□ 0.02
TCRAP04437 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
TCRAP04437 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRAP04437 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.17■□□□□ 0.02
TCRAP04437 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.17■□□□□ 0.02
TCRAP04437 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.17■□□□□ 0.02
TCRAP04437 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TCRAP04437 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.17■□□□□ 0.02
TCRAP04437 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRAP04437 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRAP04437 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TCRAP04437 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TCRAP04437 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRAP04437 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.17■□□□□ 0.02
TCRAP04437 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRAP04437 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.17■□□□□ 0.02
TCRAP04437 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.17■□□□□ 0.02
TCRAP04437 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TCRAP04437 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TCRAP04437 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.17■□□□□ 0.02
TCRAP04437 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.17■□□□□ 0.02
TCRAP04437 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.17■□□□□ 0.02
TCRAP04437 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.17■□□□□ 0.02
TCRAP04437 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRAP04437 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRAP04437 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRAP04437 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.17■□□□□ 0.02
TCRAP04437 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.17■□□□□ 0.02
TCRAP04437 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRAP04437 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TCRAP04437 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.17■□□□□ 0.02
TCRAP04437 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.16■□□□□ 0.02
TCRAP04437 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TCRAP04437 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
TCRAP04437 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.16■□□□□ 0.02
TCRAP04437 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TCRAP04437 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 AC093503.3-201ENST00000624917 2352 ntBASIC15.16■□□□□ 0.02
TCRAP04437 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 MIR939-201ENST00000401314 82 ntBASIC15.16■□□□□ 0.02
TCRAP04437 AC091799.1-201ENST00000422823 811 ntBASIC15.16■□□□□ 0.02
TCRAP04437 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TCRAP04437 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.16■□□□□ 0.02
TCRAP04437 SLC7A5P2-201ENST00000553010 536 ntBASIC15.16■□□□□ 0.02
TCRAP04437 DUX4L2-201ENST00000561772 1275 ntBASIC15.16■□□□□ 0.02
TCRAP04437 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
TCRAP04437 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.16■□□□□ 0.02
TCRAP04437 DUX4L6-201ENST00000626483 1275 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms