Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.81■□□□□ 0.6
MT-ND1P03886 AC138907.5-202ENST00000569484 235 ntBASIC18.81■□□□□ 0.6
MT-ND1P03886 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND1P03886 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.81■□□□□ 0.6
MT-ND1P03886 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND1P03886 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND1P03886 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND1P03886 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MT-ND1P03886 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.81■□□□□ 0.6
MT-ND1P03886 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
MT-ND1P03886 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
MT-ND1P03886 AC116050.2-201ENST00000612102 1779 ntBASIC18.81■□□□□ 0.6
MT-ND1P03886 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND1P03886 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND1P03886 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MT-ND1P03886 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
MT-ND1P03886 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND1P03886 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.8■□□□□ 0.6
MT-ND1P03886 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.8■□□□□ 0.6
MT-ND1P03886 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND1P03886 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND1P03886 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND1P03886 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.8■□□□□ 0.6
MT-ND1P03886 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND1P03886 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
MT-ND1P03886 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.8■□□□□ 0.6
MT-ND1P03886 BX119927.1-201ENST00000636596 1552 ntBASIC18.8■□□□□ 0.6
MT-ND1P03886 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MT-ND1P03886 LINC02228-203ENST00000641970 1355 ntBASIC18.8■□□□□ 0.6
MT-ND1P03886 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MT-ND1P03886 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
MT-ND1P03886 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.79■□□□□ 0.6
MT-ND1P03886 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.79■□□□□ 0.6
MT-ND1P03886 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.79■□□□□ 0.6
MT-ND1P03886 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.79■□□□□ 0.6
MT-ND1P03886 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 AC093503.3-201ENST00000624917 2352 ntBASIC18.79■□□□□ 0.6
MT-ND1P03886 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.79■□□□□ 0.6
MT-ND1P03886 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.79■□□□□ 0.6
MT-ND1P03886 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.79■□□□□ 0.6
MT-ND1P03886 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
MT-ND1P03886 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.79■□□□□ 0.6
MT-ND1P03886 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MT-ND1P03886 AIRN-201ENST00000601203 4374 ntBASIC18.79■□□□□ 0.6
MT-ND1P03886 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.78■□□□□ 0.6
MT-ND1P03886 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.78■□□□□ 0.6
MT-ND1P03886 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MT-ND1P03886 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.78■□□□□ 0.6
MT-ND1P03886 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.78■□□□□ 0.6
MT-ND1P03886 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MT-ND1P03886 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.78■□□□□ 0.6
MT-ND1P03886 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.78■□□□□ 0.6
MT-ND1P03886 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
MT-ND1P03886 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MT-ND1P03886 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND1P03886 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND1P03886 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND1P03886 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND1P03886 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MT-ND1P03886 KRT16P2-201ENST00000414673 1423 ntBASIC18.77■□□□□ 0.6
MT-ND1P03886 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND1P03886 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND1P03886 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND1P03886 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.77■□□□□ 0.6
MT-ND1P03886 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND1P03886 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.77■□□□□ 0.6
MT-ND1P03886 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MT-ND1P03886 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.77■□□□□ 0.6
MT-ND1P03886 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.77■□□□□ 0.6
MT-ND1P03886 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.77■□□□□ 0.6
MT-ND1P03886 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
MT-ND1P03886 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms