Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.97■□□□□ 0.95
TRUB2O95900 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB2O95900 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.97■□□□□ 0.95
TRUB2O95900 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB2O95900 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB2O95900 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB2O95900 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB2O95900 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.97■□□□□ 0.95
TRUB2O95900 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.97■□□□□ 0.95
TRUB2O95900 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB2O95900 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRUB2O95900 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB2O95900 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB2O95900 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB2O95900 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB2O95900 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.96■□□□□ 0.95
TRUB2O95900 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TRUB2O95900 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB2O95900 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.96■□□□□ 0.95
TRUB2O95900 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB2O95900 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRUB2O95900 CD99P1-205ENST00000527459 561 ntBASIC20.96■□□□□ 0.95
TRUB2O95900 PNMA6B-201ENST00000538162 1200 ntBASIC20.96■□□□□ 0.95
TRUB2O95900 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TRUB2O95900 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.96■□□□□ 0.95
TRUB2O95900 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TRUB2O95900 BX119927.1-201ENST00000636596 1552 ntBASIC20.96■□□□□ 0.95
TRUB2O95900 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.96■□□□□ 0.95
TRUB2O95900 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.96■□□□□ 0.95
TRUB2O95900 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB2O95900 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TRUB2O95900 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB2O95900 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRUB2O95900 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.96■□□□□ 0.95
TRUB2O95900 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TRUB2O95900 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.95■□□□□ 0.94
TRUB2O95900 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.95■□□□□ 0.94
TRUB2O95900 AC023632.3-201ENST00000521633 145 ntBASIC20.95■□□□□ 0.94
TRUB2O95900 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.95■□□□□ 0.94
TRUB2O95900 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.95■□□□□ 0.94
TRUB2O95900 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.95■□□□□ 0.94
TRUB2O95900 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.95■□□□□ 0.94
TRUB2O95900 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRUB2O95900 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.94■□□□□ 0.94
TRUB2O95900 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRUB2O95900 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRUB2O95900 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRUB2O95900 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
TRUB2O95900 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
TRUB2O95900 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRUB2O95900 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRUB2O95900 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.94■□□□□ 0.94
TRUB2O95900 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.94■□□□□ 0.94
TRUB2O95900 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.94■□□□□ 0.94
TRUB2O95900 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRUB2O95900 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.94■□□□□ 0.94
TRUB2O95900 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.94■□□□□ 0.94
TRUB2O95900 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TRUB2O95900 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRUB2O95900 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TRUB2O95900 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.94■□□□□ 0.94
TRUB2O95900 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TRUB2O95900 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TRUB2O95900 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB2O95900 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB2O95900 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB2O95900 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB2O95900 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB2O95900 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB2O95900 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.93■□□□□ 0.94
TRUB2O95900 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB2O95900 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.93■□□□□ 0.94
TRUB2O95900 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.93■□□□□ 0.94
TRUB2O95900 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.93■□□□□ 0.94
TRUB2O95900 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB2O95900 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB2O95900 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.93■□□□□ 0.94
TRUB2O95900 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB2O95900 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB2O95900 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB2O95900 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.93■□□□□ 0.94
TRUB2O95900 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRUB2O95900 AFG3L1P-217ENST00000557444 2447 ntBASIC20.93■□□□□ 0.94
TRUB2O95900 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.93■□□□□ 0.94
TRUB2O95900 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TRUB2O95900 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRUB2O95900 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms