Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.49■■□□□ 1.19
GGPS1O95749 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
GGPS1O95749 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
GGPS1O95749 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.49■■□□□ 1.19
GGPS1O95749 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
GGPS1O95749 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
GGPS1O95749 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.48■■□□□ 1.19
GGPS1O95749 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
GGPS1O95749 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
GGPS1O95749 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
GGPS1O95749 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
GGPS1O95749 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
GGPS1O95749 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.48■■□□□ 1.19
GGPS1O95749 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.48■■□□□ 1.19
GGPS1O95749 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.48■■□□□ 1.19
GGPS1O95749 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
GGPS1O95749 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.48■■□□□ 1.19
GGPS1O95749 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
GGPS1O95749 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
GGPS1O95749 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
GGPS1O95749 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
GGPS1O95749 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.48■■□□□ 1.19
GGPS1O95749 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
GGPS1O95749 AC007225.1-201ENST00000566331 1836 ntBASIC22.47■■□□□ 1.19
GGPS1O95749 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
GGPS1O95749 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.47■■□□□ 1.19
GGPS1O95749 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
GGPS1O95749 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
GGPS1O95749 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
GGPS1O95749 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.47■■□□□ 1.19
GGPS1O95749 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
GGPS1O95749 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
GGPS1O95749 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
GGPS1O95749 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.47■■□□□ 1.19
GGPS1O95749 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.47■■□□□ 1.19
GGPS1O95749 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
GGPS1O95749 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.47■■□□□ 1.19
GGPS1O95749 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.47■■□□□ 1.19
GGPS1O95749 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
GGPS1O95749 KRT8P17-201ENST00000453110 1448 ntBASIC22.47■■□□□ 1.19
GGPS1O95749 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.47■■□□□ 1.19
GGPS1O95749 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.47■■□□□ 1.19
GGPS1O95749 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
GGPS1O95749 DPP3P2-201ENST00000416030 1696 ntBASIC22.46■■□□□ 1.19
GGPS1O95749 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
GGPS1O95749 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
GGPS1O95749 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
GGPS1O95749 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.46■■□□□ 1.19
GGPS1O95749 KRT16P5-201ENST00000455284 522 ntBASIC22.46■■□□□ 1.19
GGPS1O95749 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.46■■□□□ 1.19
GGPS1O95749 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.46■■□□□ 1.19
GGPS1O95749 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
GGPS1O95749 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.46■■□□□ 1.19
GGPS1O95749 AC073912.3-201ENST00000624414 853 ntBASIC22.46■■□□□ 1.19
GGPS1O95749 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
GGPS1O95749 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
GGPS1O95749 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.46■■□□□ 1.19
GGPS1O95749 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
GGPS1O95749 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
GGPS1O95749 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
GGPS1O95749 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC22.46■■□□□ 1.19
GGPS1O95749 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
GGPS1O95749 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.46■■□□□ 1.19
GGPS1O95749 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
GGPS1O95749 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
GGPS1O95749 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.45■■□□□ 1.19
GGPS1O95749 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
GGPS1O95749 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
GGPS1O95749 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
GGPS1O95749 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
GGPS1O95749 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.45■■□□□ 1.18
GGPS1O95749 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
GGPS1O95749 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
GGPS1O95749 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
GGPS1O95749 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.45■■□□□ 1.18
GGPS1O95749 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
GGPS1O95749 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.45■■□□□ 1.18
GGPS1O95749 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
GGPS1O95749 KRT17P2-201ENST00000300992 1314 ntBASIC22.45■■□□□ 1.18
GGPS1O95749 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
GGPS1O95749 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.45■■□□□ 1.18
GGPS1O95749 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.45■■□□□ 1.18
GGPS1O95749 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
GGPS1O95749 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
GGPS1O95749 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.45■■□□□ 1.18
GGPS1O95749 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
GGPS1O95749 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
GGPS1O95749 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
GGPS1O95749 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
GGPS1O95749 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
GGPS1O95749 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
GGPS1O95749 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.44■■□□□ 1.18
GGPS1O95749 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
GGPS1O95749 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.18
GGPS1O95749 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.44■■□□□ 1.18
GGPS1O95749 HTR7P1-201ENST00000538670 1336 ntBASIC22.44■■□□□ 1.18
GGPS1O95749 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
GGPS1O95749 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
GGPS1O95749 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
GGPS1O95749 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms