Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH16O75309 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH16O75309 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH16O75309 AC243732.1-201ENST00000612648 864 ntBASIC20.17■□□□□ 0.82
CDH16O75309 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.17■□□□□ 0.82
CDH16O75309 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH16O75309 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH16O75309 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CDH16O75309 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH16O75309 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CDH16O75309 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CDH16O75309 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH16O75309 AC009237.14-201ENST00000609975 1594 ntBASIC20.17■□□□□ 0.82
CDH16O75309 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH16O75309 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.16■□□□□ 0.82
CDH16O75309 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH16O75309 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH16O75309 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CDH16O75309 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CDH16O75309 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH16O75309 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH16O75309 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDH16O75309 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CDH16O75309 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.16■□□□□ 0.82
CDH16O75309 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH16O75309 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH16O75309 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH16O75309 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CDH16O75309 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.16■□□□□ 0.82
CDH16O75309 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH16O75309 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH16O75309 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDH16O75309 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH16O75309 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH16O75309 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.16■□□□□ 0.82
CDH16O75309 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.16■□□□□ 0.82
CDH16O75309 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDH16O75309 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
CDH16O75309 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH16O75309 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH16O75309 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
CDH16O75309 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CDH16O75309 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDH16O75309 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH16O75309 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.15■□□□□ 0.82
CDH16O75309 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.15■□□□□ 0.82
CDH16O75309 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.15■□□□□ 0.82
CDH16O75309 CCDC92B-201ENST00000575506 885 ntBASIC20.15■□□□□ 0.82
CDH16O75309 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CDH16O75309 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDH16O75309 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CDH16O75309 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.15■□□□□ 0.82
CDH16O75309 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.15■□□□□ 0.82
CDH16O75309 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH16O75309 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDH16O75309 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDH16O75309 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.14■□□□□ 0.81
CDH16O75309 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH16O75309 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH16O75309 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH16O75309 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CDH16O75309 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH16O75309 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH16O75309 IRS3P-201ENST00000223076 1006 ntBASIC20.14■□□□□ 0.81
CDH16O75309 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.14■□□□□ 0.81
CDH16O75309 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.14■□□□□ 0.81
CDH16O75309 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.14■□□□□ 0.81
CDH16O75309 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH16O75309 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH16O75309 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH16O75309 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CDH16O75309 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH16O75309 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH16O75309 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH16O75309 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH16O75309 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH16O75309 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.13■□□□□ 0.81
CDH16O75309 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CDH16O75309 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.13■□□□□ 0.81
CDH16O75309 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH16O75309 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH16O75309 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CDH16O75309 AC105265.2-201ENST00000467189 838 ntBASIC20.13■□□□□ 0.81
CDH16O75309 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH16O75309 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDH16O75309 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.13■□□□□ 0.81
CDH16O75309 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms