Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FOXD2O60548 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FOXD2O60548 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.09■□□□□ 0.81
FOXD2O60548 HTR7P1-201ENST00000538670 1336 ntBASIC20.09■□□□□ 0.81
FOXD2O60548 AC080038.3-201ENST00000623346 1952 ntBASIC20.09■□□□□ 0.81
FOXD2O60548 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
FOXD2O60548 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
FOXD2O60548 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
FOXD2O60548 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
FOXD2O60548 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXD2O60548 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXD2O60548 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
FOXD2O60548 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.09■□□□□ 0.81
FOXD2O60548 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXD2O60548 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
FOXD2O60548 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXD2O60548 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXD2O60548 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXD2O60548 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXD2O60548 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FOXD2O60548 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FOXD2O60548 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
FOXD2O60548 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXD2O60548 LINC01568-207ENST00000641790 1380 ntBASIC20.08■□□□□ 0.81
FOXD2O60548 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXD2O60548 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXD2O60548 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
FOXD2O60548 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.08■□□□□ 0.81
FOXD2O60548 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FOXD2O60548 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.08■□□□□ 0.81
FOXD2O60548 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.08■□□□□ 0.81
FOXD2O60548 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.08■□□□□ 0.81
FOXD2O60548 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.08■□□□□ 0.81
FOXD2O60548 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.8
FOXD2O60548 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
FOXD2O60548 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXD2O60548 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.08■□□□□ 0.8
FOXD2O60548 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
FOXD2O60548 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FOXD2O60548 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.07■□□□□ 0.8
FOXD2O60548 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXD2O60548 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXD2O60548 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXD2O60548 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FOXD2O60548 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXD2O60548 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXD2O60548 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
FOXD2O60548 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXD2O60548 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
FOXD2O60548 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXD2O60548 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
FOXD2O60548 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
FOXD2O60548 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
FOXD2O60548 NAPSB-206ENST00000562112 1266 ntBASIC20.07■□□□□ 0.8
FOXD2O60548 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.07■□□□□ 0.8
FOXD2O60548 AL121829.2-201ENST00000620908 328 ntBASIC20.07■□□□□ 0.8
FOXD2O60548 AC006557.6-201ENST00000623071 864 ntBASIC20.07■□□□□ 0.8
FOXD2O60548 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXD2O60548 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
FOXD2O60548 AC087633.2-202ENST00000565166 1439 ntBASIC20.07■□□□□ 0.8
FOXD2O60548 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FOXD2O60548 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.07■□□□□ 0.8
FOXD2O60548 FAM99A-202ENST00000538190 1989 ntBASIC20.06■□□□□ 0.8
FOXD2O60548 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD2O60548 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD2O60548 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD2O60548 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD2O60548 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD2O60548 AC116050.2-201ENST00000612102 1779 ntBASIC20.06■□□□□ 0.8
FOXD2O60548 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD2O60548 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
FOXD2O60548 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD2O60548 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD2O60548 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD2O60548 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD2O60548 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.06■□□□□ 0.8
FOXD2O60548 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.06■□□□□ 0.8
FOXD2O60548 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
FOXD2O60548 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FOXD2O60548 AC087388.1-201ENST00000571370 1112 ntBASIC20.06■□□□□ 0.8
FOXD2O60548 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
FOXD2O60548 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
FOXD2O60548 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
FOXD2O60548 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
FOXD2O60548 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXD2O60548 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXD2O60548 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXD2O60548 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FOXD2O60548 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXD2O60548 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
FOXD2O60548 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXD2O60548 RBM17P1-201ENST00000453646 1190 ntBASIC20.05■□□□□ 0.8
FOXD2O60548 NUDT16P1-203ENST00000513809 620 ntBASIC20.05■□□□□ 0.8
FOXD2O60548 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.05■□□□□ 0.8
FOXD2O60548 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXD2O60548 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXD2O60548 AL031963.3-201ENST00000606441 850 ntBASIC20.05■□□□□ 0.8
FOXD2O60548 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.05■□□□□ 0.8
FOXD2O60548 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FOXD2O60548 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms