Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA12O60330 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 Z98882.1-201ENST00000622160 2253 ntBASIC19.82■□□□□ 0.76
PCDHGA12O60330 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA12O60330 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PCDHGA12O60330 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PCDHGA12O60330 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PCDHGA12O60330 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.81■□□□□ 0.76
PCDHGA12O60330 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHGA12O60330 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PCDHGA12O60330 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.81■□□□□ 0.76
PCDHGA12O60330 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHGA12O60330 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHGA12O60330 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHGA12O60330 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
PCDHGA12O60330 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA12O60330 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA12O60330 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PCDHGA12O60330 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA12O60330 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
PCDHGA12O60330 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGA12O60330 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA12O60330 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA12O60330 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA12O60330 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA12O60330 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA12O60330 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA12O60330 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGA12O60330 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHGA12O60330 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGA12O60330 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHGA12O60330 AL121829.2-201ENST00000620908 328 ntBASIC19.8■□□□□ 0.76
PCDHGA12O60330 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGA12O60330 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA12O60330 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA12O60330 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA12O60330 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PCDHGA12O60330 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PCDHGA12O60330 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA12O60330 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA12O60330 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGA12O60330 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA12O60330 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA12O60330 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHGA12O60330 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA12O60330 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGA12O60330 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PCDHGA12O60330 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHGA12O60330 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PCDHGA12O60330 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGA12O60330 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGA12O60330 AC026471.5-201ENST00000615068 467 ntBASIC19.79■□□□□ 0.76
PCDHGA12O60330 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PCDHGA12O60330 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms