Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TO15178 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.42■□□□□ 0.54
TO15178 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TO15178 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.41■□□□□ 0.54
TO15178 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.41■□□□□ 0.54
TO15178 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.41■□□□□ 0.54
TO15178 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.41■□□□□ 0.54
TO15178 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.41■□□□□ 0.54
TO15178 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.41■□□□□ 0.54
TO15178 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.41■□□□□ 0.54
TO15178 CD99P1-205ENST00000527459 561 ntBASIC18.41■□□□□ 0.54
TO15178 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TO15178 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
TO15178 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.41■□□□□ 0.54
TO15178 SOX15-203ENST00000570788 1093 ntBASIC18.41■□□□□ 0.54
TO15178 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.41■□□□□ 0.54
TO15178 AC006557.6-201ENST00000623071 864 ntBASIC18.41■□□□□ 0.54
TO15178 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.41■□□□□ 0.54
TO15178 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
TO15178 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
TO15178 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.41■□□□□ 0.54
TO15178 AC099778.1-201ENST00000568593 1911 ntBASIC18.41■□□□□ 0.54
TO15178 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TO15178 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TO15178 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.4■□□□□ 0.54
TO15178 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TO15178 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
TO15178 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.4■□□□□ 0.54
TO15178 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TO15178 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.4■□□□□ 0.54
TO15178 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.4■□□□□ 0.54
TO15178 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TO15178 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TO15178 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TO15178 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.4■□□□□ 0.54
TO15178 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TO15178 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.39■□□□□ 0.53
TO15178 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.39■□□□□ 0.53
TO15178 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TO15178 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TO15178 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.39■□□□□ 0.53
TO15178 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.39■□□□□ 0.53
TO15178 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TO15178 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TO15178 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.39■□□□□ 0.53
TO15178 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.39■□□□□ 0.53
TO15178 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TO15178 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.39■□□□□ 0.53
TO15178 AC008687.6-201ENST00000596318 630 ntBASIC18.39■□□□□ 0.53
TO15178 AC120498.8-201ENST00000614275 531 ntBASIC18.39■□□□□ 0.53
TO15178 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.39■□□□□ 0.53
TO15178 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TO15178 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.39■□□□□ 0.53
TO15178 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TO15178 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TO15178 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TO15178 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TO15178 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.39■□□□□ 0.53
TO15178 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TO15178 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TO15178 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TO15178 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TO15178 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TO15178 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TO15178 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TO15178 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TO15178 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TO15178 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms