Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC189A1A4V9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 AC007322.4-201ENST00000509611 723 ntBASIC19.94■□□□□ 0.78
CCDC189A1A4V9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC189A1A4V9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 AC034268.1-201ENST00000441047 882 ntBASIC19.93■□□□□ 0.78
CCDC189A1A4V9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 KRT18P61-201ENST00000585825 1298 ntBASIC19.93■□□□□ 0.78
CCDC189A1A4V9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 UBE2DNL-204ENST00000602536 740 ntBASIC19.93■□□□□ 0.78
CCDC189A1A4V9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 AC011270.2-201ENST00000624293 2550 ntBASIC19.93■□□□□ 0.78
CCDC189A1A4V9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 TNXA-203ENST00000507684 2038 ntBASIC19.93■□□□□ 0.78
CCDC189A1A4V9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC189A1A4V9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 AL591742.1-201ENST00000604433 565 ntBASIC19.92■□□□□ 0.78
CCDC189A1A4V9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC189A1A4V9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 TERF1P5-201ENST00000477545 1207 ntBASIC19.91■□□□□ 0.78
CCDC189A1A4V9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC189A1A4V9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms