Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 KRT87P-202ENST00000534226 1464 ntBASIC17.42■□□□□ 0.38
SHISA3A0PJX4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.42■□□□□ 0.38
SHISA3A0PJX4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 AC104581.1-202ENST00000635932 2618 ntBASIC17.41■□□□□ 0.38
SHISA3A0PJX4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 AL136116.3-201ENST00000402907 1138 ntBASIC17.41■□□□□ 0.38
SHISA3A0PJX4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 SLC7A5P2-201ENST00000553010 536 ntBASIC17.41■□□□□ 0.38
SHISA3A0PJX4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHISA3A0PJX4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 AC091799.1-201ENST00000422823 811 ntBASIC17.4■□□□□ 0.38
SHISA3A0PJX4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 AC135279.3-201ENST00000610945 1311 ntBASIC17.4■□□□□ 0.38
SHISA3A0PJX4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SHISA3A0PJX4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SHISA3A0PJX4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 AC010141.2-201ENST00000452426 721 ntBASIC17.39■□□□□ 0.37
SHISA3A0PJX4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.39■□□□□ 0.37
SHISA3A0PJX4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.39■□□□□ 0.37
SHISA3A0PJX4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SHISA3A0PJX4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms