Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.71■□□□□ 0.59
TCRBV3S1A0A5B6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
TCRBV3S1A0A5B6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.71■□□□□ 0.58
TCRBV3S1A0A5B6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TCRBV3S1A0A5B6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.71■□□□□ 0.58
TCRBV3S1A0A5B6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.7■□□□□ 0.58
TCRBV3S1A0A5B6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 KRT87P-202ENST00000534226 1464 ntBASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV3S1A0A5B6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 FAM21FP-204ENST00000608637 956 ntBASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV3S1A0A5B6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV3S1A0A5B6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV3S1A0A5B6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV3S1A0A5B6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TCRBV3S1A0A5B6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TCRBV3S1A0A5B6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.67■□□□□ 0.58
TCRBV3S1A0A5B6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV3S1A0A5B6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV3S1A0A5B6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms