Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC196A0A1B0GTZ2 AC060766.5-201ENST00000590539 871 ntBASIC23.27■■□□□ 1.32
CCDC196A0A1B0GTZ2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC196A0A1B0GTZ2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.27■■□□□ 1.32
CCDC196A0A1B0GTZ2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
CCDC196A0A1B0GTZ2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC196A0A1B0GTZ2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.27■■□□□ 1.32
CCDC196A0A1B0GTZ2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC196A0A1B0GTZ2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CCDC196A0A1B0GTZ2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CCDC196A0A1B0GTZ2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.26■■□□□ 1.31
CCDC196A0A1B0GTZ2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.26■■□□□ 1.31
CCDC196A0A1B0GTZ2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC196A0A1B0GTZ2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC196A0A1B0GTZ2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC196A0A1B0GTZ2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC196A0A1B0GTZ2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC196A0A1B0GTZ2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CCDC196A0A1B0GTZ2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CCDC196A0A1B0GTZ2 AC073130.3-201ENST00000624389 2278 ntBASIC23.26■■□□□ 1.31
CCDC196A0A1B0GTZ2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
CCDC196A0A1B0GTZ2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC196A0A1B0GTZ2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 AC092368.3-202ENST00000574180 1591 ntBASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.25■■□□□ 1.31
CCDC196A0A1B0GTZ2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 TCF3P1-201ENST00000423021 1937 ntBASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC196A0A1B0GTZ2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC196A0A1B0GTZ2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 PNMA6B-201ENST00000538162 1200 ntBASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC196A0A1B0GTZ2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms