Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV5A0A0B4J1U4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV5A0A0B4J1U4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRGV5A0A0B4J1U4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV5A0A0B4J1U4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRGV5A0A0B4J1U4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV5A0A0B4J1U4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRGV5A0A0B4J1U4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.96■□□□□ 0.47
TRGV5A0A0B4J1U4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRGV5A0A0B4J1U4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
TRGV5A0A0B4J1U4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRGV5A0A0B4J1U4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 KRT16P5-201ENST00000455284 522 ntBASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 AC004264.1-201ENST00000608354 794 ntBASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 AL049637.2-201ENST00000641778 930 ntBASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 KRT16P6-202ENST00000425692 1426 ntBASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRGV5A0A0B4J1U4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV5A0A0B4J1U4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms