Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TCF3P1-201ENST00000423021 1937 ntBASIC15.53■□□□□ 0.08
TRBV7-1A0A0A6YYK4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.52■□□□□ 0.08
TRBV7-1A0A0A6YYK4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
TRBV7-1A0A0A6YYK4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV7-1A0A0A6YYK4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.52■□□□□ 0.07
TRBV7-1A0A0A6YYK4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV7-1A0A0A6YYK4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV7-1A0A0A6YYK4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRBV7-1A0A0A6YYK4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AL391422.3-201ENST00000603791 2761 ntBASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AL390719.1-204ENST00000412397 1219 ntBASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 DUSP5P2-201ENST00000426873 1033 ntBASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV7-1A0A0A6YYK4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRBV7-1A0A0A6YYK4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms