Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC008040.4-201ENST00000494834 768 ntBASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 RN7SL445P-201ENST00000495609 293 ntBASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 FTH1P8-201ENST00000498161 514 ntBASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC112225.1-201ENST00000508230 297 ntBASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 SAA3P-201ENST00000533267 365 ntBASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 MYL6-211ENST00000548580 528 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC012181.2-201ENST00000570210 699 ntBASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC108451.2-201ENST00000603875 538 ntBASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 OR5AU1-204ENST00000641822 1197 ntBASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-DRB4X5D2U9 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AC130456.1-201ENST00000565085 1363 ntBASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 MTND4LP17-201ENST00000414607 293 ntBASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AL390840.1-201ENST00000420303 988 ntBASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AC091390.2-201ENST00000432573 374 ntBASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 RN7SL282P-201ENST00000479676 297 ntBASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AC066616.1-201ENST00000486795 413 ntBASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AC117383.2-201ENST00000514722 322 ntBASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AC087257.2-201ENST00000538759 928 ntBASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 CRADD-210ENST00000552033 622 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 MIR4301-201ENST00000577203 66 ntBASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AF186192.2-204ENST00000581667 524 ntBASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 EIF1-207ENST00000591776 797 ntTSL 4 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 MIR6807-201ENST00000621968 92 ntBASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 AL590396.3-201ENST00000636334 300 ntBASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DRB4X5D2U9 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms