Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 HSPD1P9-201ENST00000420325 1636 ntBASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 AC064862.4-201ENST00000442180 334 ntBASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 AC006499.3-201ENST00000506077 748 ntBASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 AL445649.1-201ENST00000615941 691 ntBASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 GPR156-203ENST00000464295 4442 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 AC022150.4-201ENST00000598322 2848 ntBASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 LINC02504-201ENST00000512241 4949 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 FANCA-230ENST00000568369 4601 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 EEF1B2P8-201ENST00000414101 671 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC094019.1-201ENST00000434678 472 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 TMEM97P2-201ENST00000517841 403 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 MIR7155-201ENST00000615925 56 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 FAM172A-201ENST00000395965 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ZNF568-202ENST00000415168 3774 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC007126.1-201ENST00000508202 4781 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 PPFIA2-214ENST00000549325 4727 ntTSL 5 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ABCC11-201ENST00000353782 4463 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 MAPK10-329ENST00000641555 2656 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 DDX43P1-201ENST00000510713 1763 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 PPIAP22-201ENST00000358455 498 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 RPL5P6-201ENST00000425640 886 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 PPIAP7-201ENST00000454070 489 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AP000620.1-201ENST00000527147 504 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC006924.1-201ENST00000610750 559 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 PMS2CL-204ENST00000486256 3327 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 TKTL2-201ENST00000280605 2654 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ZMAT3-201ENST00000311417 9406 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 PRDM1-201ENST00000369089 4675 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 ABCC11-202ENST00000356608 4612 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 AL139806.1-201ENST00000403057 1002 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 RNU4-34P-201ENST00000410431 124 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 AL590004.3-202ENST00000445883 451 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 AC098847.1-201ENST00000473094 348 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 RN7SL727P-201ENST00000482164 296 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 AL158068.1-201ENST00000506116 616 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 RNA5SP418-201ENST00000515951 117 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 ZNF300-202ENST00000394226 3256 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 C9orf131-202ENST00000354479 3184 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms