Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 HSPD1P9-201ENST00000420325 1636 ntBASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 AC064862.4-201ENST00000442180 334 ntBASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 AC006499.3-201ENST00000506077 748 ntBASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 AL445649.1-201ENST00000615941 691 ntBASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 GPR156-203ENST00000464295 4442 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 AC022150.4-201ENST00000598322 2848 ntBASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 LINC02504-201ENST00000512241 4949 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 FANCA-230ENST00000568369 4601 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
RIMBP3Q9UFD9 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 EEF1B2P8-201ENST00000414101 671 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC094019.1-201ENST00000434678 472 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 TMEM97P2-201ENST00000517841 403 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 MIR7155-201ENST00000615925 56 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 FAM172A-201ENST00000395965 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ZNF568-202ENST00000415168 3774 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC007126.1-201ENST00000508202 4781 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 PPFIA2-214ENST00000549325 4727 ntTSL 5 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ABCC11-201ENST00000353782 4463 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 MAPK10-329ENST00000641555 2656 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 DDX43P1-201ENST00000510713 1763 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 PPIAP22-201ENST00000358455 498 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 RPL5P6-201ENST00000425640 886 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 PPIAP7-201ENST00000454070 489 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AP000620.1-201ENST00000527147 504 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC006924.1-201ENST00000610750 559 ntBASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 PMS2CL-204ENST00000486256 3327 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 TKTL2-201ENST00000280605 2654 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ZMAT3-201ENST00000311417 9406 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC10.76□□□□□ -0.69
RIMBP3Q9UFD9 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 PRDM1-201ENST00000369089 4675 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 ABCC11-202ENST00000356608 4612 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 AL139806.1-201ENST00000403057 1002 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 RNU4-34P-201ENST00000410431 124 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 AL590004.3-202ENST00000445883 451 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 AC098847.1-201ENST00000473094 348 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 RN7SL727P-201ENST00000482164 296 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 AL158068.1-201ENST00000506116 616 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 RNA5SP418-201ENST00000515951 117 ntBASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 ZNF300-202ENST00000394226 3256 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 C9orf131-202ENST00000354479 3184 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RIMBP3Q9UFD9 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms