Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL158042.1-201ENST00000605338 460 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AC135050.6-202ENST00000613584 392 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AC241377.2-202ENST00000636462 997 ntBASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
SHKBP1Q8TBC3 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
SHKBP1Q8TBC3 CD200-202ENST00000383681 1997 ntTSL 2 BASIC8.15□□□□□ -1.11
SHKBP1Q8TBC3 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.15□□□□□ -1.11
SHKBP1Q8TBC3 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
SHKBP1Q8TBC3 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
SHKBP1Q8TBC3 AL365475.1-201ENST00000565135 1949 ntBASIC8.15□□□□□ -1.11
SHKBP1Q8TBC3 LINC02408-201ENST00000400306 1766 ntTSL 2 BASIC8.15□□□□□ -1.11
SHKBP1Q8TBC3 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
SHKBP1Q8TBC3 AL591543.1-202ENST00000642095 4149 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC108099.1-201ENST00000564402 3258 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 RNU6-891P-201ENST00000384280 111 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AL589655.1-201ENST00000405398 482 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AL024507.1-201ENST00000412741 274 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 TRIM60P5Y-201ENST00000413946 574 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 VN1R31P-201ENST00000417498 730 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC073464.3-201ENST00000422564 712 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC003071.2-201ENST00000423857 315 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 NPM1P23-201ENST00000440193 849 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 Z73417.1-201ENST00000447373 778 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC087385.2-201ENST00000477729 498 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 CEACAMP3-202ENST00000483806 638 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 SNORD116-30-201ENST00000516468 85 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC008677.3-201ENST00000519146 666 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC104115.2-201ENST00000523026 687 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 ASB8-203ENST00000535988 679 ntTSL 2 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC092368.2-201ENST00000565911 600 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC244090.2-201ENST00000567614 792 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC109446.2-201ENST00000567872 497 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AL021918.1-201ENST00000603933 236 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC078880.5-201ENST00000617845 421 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AL157770.1-201ENST00000623049 439 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC010653.3-201ENST00000635332 232 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 ENSA-215ENST00000638926 360 ntTSL 5 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 AC119674.1-209ENST00000642031 997 ntBASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8.14□□□□□ -1.11
SHKBP1Q8TBC3 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 MAPK10-377ENST00000642006 2752 ntBASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 AC245100.4-203ENST00000635493 1357 ntTSL 5 BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 AC020895.2-201ENST00000624996 1839 ntBASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 AC233968.1-201ENST00000611212 1300 ntBASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 OR5H2-201ENST00000355273 945 ntBASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 RNU4-24P-201ENST00000364565 139 ntBASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 RNA5SP79-201ENST00000365193 109 ntBASIC8.13□□□□□ -1.11
SHKBP1Q8TBC3 RN7SKP208-201ENST00000365474 361 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms