Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM71Q2Q1W2 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM71Q2Q1W2 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.89□□□□□ -1.15
TRIM71Q2Q1W2 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM71Q2Q1W2 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM71Q2Q1W2 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM71Q2Q1W2 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.89□□□□□ -1.15
TRIM71Q2Q1W2 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM71Q2Q1W2 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM71Q2Q1W2 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM71Q2Q1W2 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
TRIM71Q2Q1W2 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 AP000766.1-201ENST00000561746 4140 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 HSPA8P11-201ENST00000508840 1898 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 MIR191-201ENST00000384873 92 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 RPSAP60-201ENST00000415403 880 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 RPL24P2-201ENST00000421023 475 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 CHCHD3P1-201ENST00000425516 676 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 GAPDHP34-201ENST00000432112 823 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 AC096632.2-201ENST00000438139 1239 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 NPM1P9-201ENST00000453156 844 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 BX323845.2-201ENST00000458382 234 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 AC253576.1-201ENST00000511645 1156 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 IGHVIII-26-1-201ENST00000520387 250 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 ST13P6-201ENST00000522430 1102 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 OR7E158P-201ENST00000524483 910 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 AL161912.3-201ENST00000605404 628 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 AC140479.4-205ENST00000636339 820 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 AL596275.2-207ENST00000641188 675 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 TMEM75-201ENST00000624314 2165 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 AC011008.2-201ENST00000624866 3352 ntBASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
TRIM71Q2Q1W2 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 AC068733.2-201ENST00000605434 1418 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 AL031123.3-201ENST00000623345 1837 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 AC004023.1-201ENST00000561473 1744 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 RNA5SP176-201ENST00000390956 110 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 AL353133.1-201ENST00000407695 401 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 AL136100.1-201ENST00000407696 330 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 RN7SKP146-201ENST00000410242 334 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 RN7SKP221-201ENST00000410420 301 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 PTPN2P1-201ENST00000423212 1072 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 RPL3P11-201ENST00000434028 1146 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 RPL23P10-201ENST00000468780 412 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 AP003385.3-201ENST00000472498 287 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 AC044810.1-201ENST00000480271 711 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 RPL5P33-201ENST00000487833 905 ntBASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM71Q2Q1W2 PRR13P5-201ENST00000596581 442 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms