Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC067805.1-201ENST00000559344 470 ntBASIC7.59□□□□□ -1.19
NEK3P51956 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NEK3P51956 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC7.59□□□□□ -1.19
NEK3P51956 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC7.59□□□□□ -1.19
NEK3P51956 AC098590.2-201ENST00000614787 281 ntBASIC7.59□□□□□ -1.19
NEK3P51956 RN7SL680P-201ENST00000620379 299 ntBASIC7.59□□□□□ -1.19
NEK3P51956 AC073857.1-201ENST00000625082 1054 ntBASIC7.59□□□□□ -1.19
NEK3P51956 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.59□□□□□ -1.19
NEK3P51956 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC7.59□□□□□ -1.19
NEK3P51956 FGL2-202ENST00000637771 989 ntBASIC7.59□□□□□ -1.19
NEK3P51956 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NEK3P51956 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NEK3P51956 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.59□□□□□ -1.19
NEK3P51956 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
NEK3P51956 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
NEK3P51956 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
NEK3P51956 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.59□□□□□ -1.19
NEK3P51956 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.59□□□□□ -1.19
NEK3P51956 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.2
NEK3P51956 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.59□□□□□ -1.2
NEK3P51956 SOCS5P5-201ENST00000402732 1586 ntBASIC7.59□□□□□ -1.2
NEK3P51956 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
NEK3P51956 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
NEK3P51956 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.58□□□□□ -1.2
NEK3P51956 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
NEK3P51956 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 SPATA31C1-201ENST00000420021 3895 ntBASIC7.58□□□□□ -1.2
NEK3P51956 SF3A3P1-201ENST00000446317 1477 ntBASIC7.58□□□□□ -1.2
NEK3P51956 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
NEK3P51956 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
NEK3P51956 AC083799.1-201ENST00000366451 910 ntBASIC7.58□□□□□ -1.2
NEK3P51956 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC7.58□□□□□ -1.2
NEK3P51956 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.58□□□□□ -1.2
NEK3P51956 NUS1P4-201ENST00000401550 585 ntBASIC7.58□□□□□ -1.2
NEK3P51956 SNORA2C-201ENST00000408564 137 ntBASIC7.58□□□□□ -1.2
NEK3P51956 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC7.58□□□□□ -1.2
NEK3P51956 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 OR52U1P-201ENST00000439752 923 ntBASIC7.58□□□□□ -1.2
NEK3P51956 AL353803.3-201ENST00000444641 335 ntBASIC7.58□□□□□ -1.2
NEK3P51956 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC7.58□□□□□ -1.2
NEK3P51956 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.58□□□□□ -1.2
NEK3P51956 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
NEK3P51956 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.58□□□□□ -1.2
NEK3P51956 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.58□□□□□ -1.2
NEK3P51956 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.58□□□□□ -1.2
NEK3P51956 MRPL49P1-201ENST00000505951 535 ntBASIC7.58□□□□□ -1.2
NEK3P51956 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC7.58□□□□□ -1.2
NEK3P51956 AP001994.1-201ENST00000527539 826 ntBASIC7.58□□□□□ -1.2
NEK3P51956 HNRNPCP8-201ENST00000528764 888 ntBASIC7.58□□□□□ -1.2
NEK3P51956 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.58□□□□□ -1.2
NEK3P51956 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7.58□□□□□ -1.2
NEK3P51956 FRG2IP-201ENST00000563581 781 ntBASIC7.58□□□□□ -1.2
NEK3P51956 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC7.58□□□□□ -1.2
NEK3P51956 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.58□□□□□ -1.2
NEK3P51956 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC7.58□□□□□ -1.2
NEK3P51956 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC7.58□□□□□ -1.2
NEK3P51956 AL031429.2-201ENST00000602605 649 ntBASIC7.58□□□□□ -1.2
NEK3P51956 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.58□□□□□ -1.2
NEK3P51956 CUX2P1-201ENST00000606426 298 ntBASIC7.58□□□□□ -1.2
NEK3P51956 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 AL132796.3-201ENST00000624703 900 ntBASIC7.58□□□□□ -1.2
NEK3P51956 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.58□□□□□ -1.2
NEK3P51956 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.58□□□□□ -1.2
NEK3P51956 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.58□□□□□ -1.2
NEK3P51956 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
NEK3P51956 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.58□□□□□ -1.2
NEK3P51956 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
NEK3P51956 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.58□□□□□ -1.2
NEK3P51956 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC7.58□□□□□ -1.2
NEK3P51956 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
NEK3P51956 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC7.57□□□□□ -1.2
NEK3P51956 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NEK3P51956 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NEK3P51956 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NEK3P51956 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.57□□□□□ -1.2
NEK3P51956 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
NEK3P51956 WASF5P-205ENST00000428639 1455 ntBASIC7.57□□□□□ -1.2
NEK3P51956 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.57□□□□□ -1.2
NEK3P51956 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NEK3P51956 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
NEK3P51956 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
NEK3P51956 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
NEK3P51956 RNA5SP260-201ENST00000363849 111 ntBASIC7.57□□□□□ -1.2
NEK3P51956 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
NEK3P51956 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
NEK3P51956 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms