Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 HS6ST3-202ENST00000620595 7073 ntBASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 PPIP5K1-206ENST00000381885 5596 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 CR383656.5-201ENST00000547616 1340 ntBASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 SNORA70-201ENST00000384436 135 ntBASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 RPS3AP2-201ENST00000407190 754 ntBASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 FABP7P2-201ENST00000429946 379 ntBASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 AC036111.2-201ENST00000533247 901 ntBASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 AC092121.1-201ENST00000569452 202 ntBASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RIMBP3Q9UFD9 DEPDC5-205ENST00000400248 5307 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 LMOD1-201ENST00000367288 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 API5-210ENST00000534600 1760 ntTSL 5 BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 U3.43-201ENST00000410734 213 ntBASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 AL929472.1-201ENST00000417484 429 ntBASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 ATP5LP2-201ENST00000440646 311 ntBASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 CBX1P2-201ENST00000453841 458 ntBASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 RPS27AP2-201ENST00000457576 465 ntBASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 SETP3-201ENST00000581726 813 ntBASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 DLG1-201ENST00000346964 5034 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 MAGEE2-201ENST00000373359 2249 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 PLXNA4-202ENST00000359827 13786 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 AC027575.3-201ENST00000583058 2747 ntBASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 KBTBD12-204ENST00000407609 4302 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 ZFYVE26-207ENST00000555452 7309 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
RIMBP3Q9UFD9 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 RSPH10B2-201ENST00000297186 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 RSPH10B-201ENST00000337579 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 ARHGEF9-202ENST00000374870 4644 ntTSL 5 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 USP13-203ENST00000496897 2747 ntTSL 2 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 TRIM53BP-201ENST00000532912 1720 ntBASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 AC009784.1-201ENST00000426484 460 ntBASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 AC108161.1-201ENST00000461060 402 ntBASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 COPS8P2-201ENST00000473228 627 ntBASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 RPL12P30-201ENST00000488389 499 ntBASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 RN7SKP238-201ENST00000516483 249 ntBASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 ASB8-202ENST00000535055 657 ntTSL 2 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 NXPE2P1-201ENST00000543705 726 ntBASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 AC092332.1-201ENST00000563684 829 ntBASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 ACTG1P15-201ENST00000570019 1063 ntBASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 RBM4-213ENST00000578778 582 ntTSL 4 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 ELOCP28-201ENST00000590044 317 ntBASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RIMBP3Q9UFD9 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
RIMBP3Q9UFD9 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms