Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 AC083806.2-201ENST00000617795 2685 ntBASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 RNU1-38P-201ENST00000362817 144 ntBASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 TYMSP1-201ENST00000407851 869 ntBASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 AC087360.1-201ENST00000518788 616 ntBASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 NATP-201ENST00000523491 878 ntBASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 RPS11-203ENST00000596873 583 ntTSL 2 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 MIR7162-201ENST00000611134 69 ntBASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 AL357153.4-201ENST00000620487 1016 ntBASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 FKBP1AP4-201ENST00000631775 336 ntBASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 AC138627.1-204ENST00000641894 765 ntBASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 DDX10P2-201ENST00000417796 2614 ntBASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 AC011008.2-201ENST00000624866 3352 ntBASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
CHMP4CQ96CF2 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 SAMMSON-222ENST00000641901 2727 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 ARMCX7P-201ENST00000372828 562 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 SNORA70G-201ENST00000383923 142 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 MTND1P10-201ENST00000426108 832 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AC055733.3-201ENST00000505214 523 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 IGHVII-49-1-201ENST00000521760 224 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 NF1P12-201ENST00000549593 583 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 COX6CP11-201ENST00000555293 229 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AC024614.1-201ENST00000577546 307 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 CCDC58P1-201ENST00000578567 430 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AC006116.6-201ENST00000593258 1103 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 CUX2P1-201ENST00000606426 298 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 METAP1-212ENST00000625963 147 ntTSL 5 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AC006116.1-201ENST00000587908 2171 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AP003471.1-202ENST00000319051 1988 ntBASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
CHMP4CQ96CF2 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.72□□□□□ -1.01
CHMP4CQ96CF2 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms