Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
ALDH1A1P00352 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
ALDH1A1P00352 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
ALDH1A1P00352 FZD6-201ENST00000358755 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
ALDH1A1P00352 DCTN1-205ENST00000409567 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.92
ALDH1A1P00352 BDKRB2-203ENST00000554311 4040 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
ALDH1A1P00352 TRAPPC2-201ENST00000359680 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 SMARCD1-205ENST00000548573 2095 ntTSL 5 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 ZMYND8-213ENST00000461685 3567 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 EYA1-204ENST00000388741 3404 ntTSL 5 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 SS18-203ENST00000415083 3414 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 CALML3-AS1-202ENST00000543008 4531 ntTSL 5 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 TRIM9-203ENST00000360392 3726 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 RNU4-4P-201ENST00000364588 130 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 XGY1-201ENST00000381172 446 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 HMGB3P19-201ENST00000403971 560 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 AL390774.1-201ENST00000411924 246 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 ST13P13-201ENST00000417082 1092 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 Z75741.2-201ENST00000417272 1167 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 AL022331.1-201ENST00000429025 477 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 GAPDHP34-201ENST00000432112 823 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 ZNF965P-201ENST00000432501 817 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 FABP5P3-201ENST00000437960 408 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 RPS7P4-201ENST00000444127 582 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 AC005840.2-201ENST00000447193 355 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 PPIA-203ENST00000451562 544 ntTSL 2 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 RPL31P53-201ENST00000457065 348 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 RPL21P131-201ENST00000497298 483 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 AC091951.3-201ENST00000504093 246 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 AC004217.3-201ENST00000551552 878 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 NQO1-205ENST00000561500 891 ntTSL 3 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 RN7SL154P-201ENST00000578043 324 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 MIR1273F-201ENST00000580581 99 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 BNIP3P17-201ENST00000605448 595 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 AC099785.1-201ENST00000605697 437 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 RN7SL82P-201ENST00000611435 237 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 FAM27E3-202ENST00000614611 340 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 RN7SL628P-201ENST00000619139 237 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 ANAPC1-210ENST00000628342 450 ntTSL 5 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 AC007126.1-201ENST00000508202 4781 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 SERPINE2-203ENST00000409840 2569 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 IDI2-201ENST00000277517 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 GPRC5D-AS1-202ENST00000499948 1746 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 CENPL-201ENST00000345664 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 FSHR-201ENST00000304421 2176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 LINC00284-202ENST00000439707 2521 ntTSL 5 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 DCAF8L2-202ENST00000451261 2295 ntAPPRIS P1 TSL 4 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 AP000542.3-201ENST00000623391 6114 ntBASIC9.33□□□□□ -0.92
ALDH1A1P00352 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
ALDH1A1P00352 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC9.33□□□□□ -0.92
ALDH1A1P00352 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALDH1A1P00352 CLIP1-214ENST00000540539 2592 ntTSL 2 BASIC9.32□□□□□ -0.92
ALDH1A1P00352 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC9.32□□□□□ -0.92
ALDH1A1P00352 CYP2C19-202ENST00000480405 1417 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ALDH1A1P00352 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC9.32□□□□□ -0.92
ALDH1A1P00352 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALDH1A1P00352 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ALDH1A1P00352 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
ALDH1A1P00352 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC9.32□□□□□ -0.92
ALDH1A1P00352 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC9.32□□□□□ -0.92
ALDH1A1P00352 TBC1D22A-AS1-202ENST00000640274 1951 ntBASIC9.32□□□□□ -0.92
ALDH1A1P00352 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALDH1A1P00352 MAP3K7CL-202ENST00000339024 2066 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
ALDH1A1P00352 MAP3K7CL-208ENST00000399935 2093 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
ALDH1A1P00352 AC240565.2-201ENST00000623180 2096 ntTSL 5 BASIC9.32□□□□□ -0.92
ALDH1A1P00352 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALDH1A1P00352 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALDH1A1P00352 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
ALDH1A1P00352 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ALDH1A1P00352 LINC02239-201ENST00000504339 2290 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ALDH1A1P00352 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALDH1A1P00352 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
ALDH1A1P00352 SNORD113-6-201ENST00000363345 75 ntBASIC9.32□□□□□ -0.92
ALDH1A1P00352 Y_RNA.303-201ENST00000364998 94 ntBASIC9.32□□□□□ -0.92
ALDH1A1P00352 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms