Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 RN7SKP174-201ENST00000363803 330 ntBASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 RPS3AP5-201ENST00000389400 821 ntBASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 OSTCP2-201ENST00000437956 444 ntBASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AL161626.1-201ENST00000441480 490 ntBASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AC079781.1-201ENST00000441505 394 ntBASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 RBMY2EP-202ENST00000456360 940 ntBASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AL079303.1-201ENST00000486611 463 ntBASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AC008496.1-201ENST00000509131 295 ntBASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 CRADD-210ENST00000552033 622 ntTSL 3 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 ULK4P2-202ENST00000564187 492 ntBASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 COX6CP16-201ENST00000603667 216 ntBASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AL136985.2-201ENST00000607372 535 ntBASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AC016252.1-201ENST00000609721 474 ntBASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 AC089998.1-201ENST00000548575 3141 ntBASIC6.61□□□□□ -1.35
NPIPA3F8WFD2 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 AC110716.2-201ENST00000563865 3945 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 AC134879.1-201ENST00000426062 394 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 DBIL5P2-201ENST00000443827 253 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 RBMY2BP-202ENST00000451071 1156 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 AC040975.1-201ENST00000472104 316 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 USP9YP2-201ENST00000504503 1000 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 USP9YP1-201ENST00000513521 1002 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 AP001646.2-201ENST00000528645 1156 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 OR7E161P-201ENST00000533722 967 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 MIR378H-201ENST00000579966 83 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 AC012065.3-201ENST00000602736 439 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 AL023806.2-201ENST00000603042 263 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 AL591222.2-201ENST00000604443 754 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 AL031777.2-201ENST00000611953 196 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 AC078909.2-201ENST00000620584 398 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 AC130456.6-201ENST00000623745 765 ntBASIC6.6□□□□□ -1.35
NPIPA3F8WFD2 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms