Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 AC023886.2-201ENST00000321285 411 ntBASIC6.89□□□□□ -1.31
SKP1P63208 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.89□□□□□ -1.31
SKP1P63208 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
SKP1P63208 SNORA70.8-201ENST00000384231 136 ntBASIC6.89□□□□□ -1.31
SKP1P63208 RBBP4P4-201ENST00000398588 1289 ntBASIC6.89□□□□□ -1.31
SKP1P63208 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.89□□□□□ -1.31
SKP1P63208 TYMSP1-201ENST00000407851 869 ntBASIC6.89□□□□□ -1.31
SKP1P63208 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SKP1P63208 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.89□□□□□ -1.31
SKP1P63208 CLIC4P3-201ENST00000422221 752 ntBASIC6.89□□□□□ -1.31
SKP1P63208 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 OR52U1P-201ENST00000439752 923 ntBASIC6.89□□□□□ -1.31
SKP1P63208 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.89□□□□□ -1.31
SKP1P63208 EAF2-202ENST00000451944 960 ntTSL 2 BASIC6.89□□□□□ -1.31
SKP1P63208 NUCKS1P1-201ENST00000452067 703 ntBASIC6.89□□□□□ -1.31
SKP1P63208 BX323845.2-201ENST00000458382 234 ntBASIC6.89□□□□□ -1.31
SKP1P63208 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.89□□□□□ -1.31
SKP1P63208 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC6.89□□□□□ -1.31
SKP1P63208 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC6.89□□□□□ -1.31
SKP1P63208 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.89□□□□□ -1.31
SKP1P63208 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC6.89□□□□□ -1.31
SKP1P63208 AP006587.6-201ENST00000582128 1091 ntBASIC6.89□□□□□ -1.31
SKP1P63208 AC010327.2-201ENST00000587647 488 ntBASIC6.89□□□□□ -1.31
SKP1P63208 AP001554.1-201ENST00000604533 376 ntBASIC6.89□□□□□ -1.31
SKP1P63208 AL355333.1-201ENST00000605632 279 ntBASIC6.89□□□□□ -1.31
SKP1P63208 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.89□□□□□ -1.31
SKP1P63208 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
SKP1P63208 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC6.89□□□□□ -1.31
SKP1P63208 MFSD8-256ENST00000641949 1640 ntBASIC6.89□□□□□ -1.31
SKP1P63208 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.89□□□□□ -1.31
SKP1P63208 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC6.89□□□□□ -1.31
SKP1P63208 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SKP1P63208 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.89□□□□□ -1.31
SKP1P63208 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SKP1P63208 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.88□□□□□ -1.31
SKP1P63208 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.88□□□□□ -1.31
SKP1P63208 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.88□□□□□ -1.31
SKP1P63208 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.88□□□□□ -1.31
SKP1P63208 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.88□□□□□ -1.31
SKP1P63208 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.88□□□□□ -1.31
SKP1P63208 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.88□□□□□ -1.31
SKP1P63208 AC007923.2-201ENST00000584218 1591 ntBASIC6.88□□□□□ -1.31
SKP1P63208 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.88□□□□□ -1.31
SKP1P63208 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.88□□□□□ -1.31
SKP1P63208 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
SKP1P63208 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
SKP1P63208 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.88□□□□□ -1.31
SKP1P63208 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.88□□□□□ -1.31
SKP1P63208 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SKP1P63208 U3.14-201ENST00000365363 227 ntBASIC6.88□□□□□ -1.31
SKP1P63208 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SKP1P63208 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.88□□□□□ -1.31
SKP1P63208 AC104698.1-201ENST00000435671 276 ntBASIC6.88□□□□□ -1.31
SKP1P63208 AL161626.1-201ENST00000441480 490 ntBASIC6.88□□□□□ -1.31
SKP1P63208 AC079781.1-201ENST00000441505 394 ntBASIC6.88□□□□□ -1.31
SKP1P63208 AC093799.1-201ENST00000452411 499 ntBASIC6.88□□□□□ -1.31
SKP1P63208 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC6.88□□□□□ -1.31
SKP1P63208 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.88□□□□□ -1.31
SKP1P63208 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.88□□□□□ -1.31
SKP1P63208 LINC01085-203ENST00000511195 326 ntBASIC6.88□□□□□ -1.31
SKP1P63208 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.88□□□□□ -1.31
SKP1P63208 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.88□□□□□ -1.31
SKP1P63208 AC092368.2-201ENST00000565911 600 ntBASIC6.88□□□□□ -1.31
SKP1P63208 EEF1B2P1-201ENST00000567221 672 ntBASIC6.88□□□□□ -1.31
SKP1P63208 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.88□□□□□ -1.31
SKP1P63208 RN7SL667P-201ENST00000582817 298 ntBASIC6.88□□□□□ -1.31
SKP1P63208 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.88□□□□□ -1.31
SKP1P63208 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.88□□□□□ -1.31
SKP1P63208 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.88□□□□□ -1.31
SKP1P63208 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.88□□□□□ -1.31
SKP1P63208 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
SKP1P63208 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.88□□□□□ -1.31
SKP1P63208 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.88□□□□□ -1.31
SKP1P63208 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SKP1P63208 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms