Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
SUMO3P55854 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
SUMO3P55854 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.77□□□□□ -1.33
SUMO3P55854 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
SUMO3P55854 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
SUMO3P55854 RNU6-697P-201ENST00000363348 107 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 RN7SKP36-201ENST00000363997 312 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 COQ3-202ENST00000369240 646 ntTSL 5 BASIC6.77□□□□□ -1.33
SUMO3P55854 CCNB2P1-201ENST00000399411 1150 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.77□□□□□ -1.33
SUMO3P55854 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.77□□□□□ -1.33
SUMO3P55854 ARAFP1-201ENST00000422172 605 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 AC073464.3-201ENST00000422564 712 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.77□□□□□ -1.33
SUMO3P55854 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC6.77□□□□□ -1.33
SUMO3P55854 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.77□□□□□ -1.33
SUMO3P55854 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.77□□□□□ -1.33
SUMO3P55854 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.77□□□□□ -1.33
SUMO3P55854 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.77□□□□□ -1.33
SUMO3P55854 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC6.77□□□□□ -1.33
SUMO3P55854 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.77□□□□□ -1.33
SUMO3P55854 OR7E62P-201ENST00000456741 477 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 RN7SL870P-201ENST00000460111 296 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.77□□□□□ -1.33
SUMO3P55854 RN7SL445P-201ENST00000495609 293 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.77□□□□□ -1.33
SUMO3P55854 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.77□□□□□ -1.33
SUMO3P55854 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC6.77□□□□□ -1.33
SUMO3P55854 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC6.77□□□□□ -1.33
SUMO3P55854 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.77□□□□□ -1.33
SUMO3P55854 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
SUMO3P55854 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.77□□□□□ -1.33
SUMO3P55854 GNG2-215ENST00000557376 573 ntTSL 4 BASIC6.77□□□□□ -1.33
SUMO3P55854 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC6.77□□□□□ -1.33
SUMO3P55854 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.77□□□□□ -1.33
SUMO3P55854 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC6.77□□□□□ -1.33
SUMO3P55854 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.77□□□□□ -1.33
SUMO3P55854 AL049840.6-201ENST00000604583 345 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 AC243830.2-201ENST00000618067 630 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 AC083899.2-201ENST00000423285 1376 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
SUMO3P55854 WASF5P-205ENST00000428639 1455 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 SOCS5P5-201ENST00000402732 1586 ntBASIC6.77□□□□□ -1.33
SUMO3P55854 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SUMO3P55854 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 PSMC1P4-201ENST00000515236 1327 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 TRIM64EP-201ENST00000531233 1307 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 HDAC1P1-201ENST00000455482 1445 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SUMO3P55854 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC6.76□□□□□ -1.33
SUMO3P55854 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.76□□□□□ -1.33
SUMO3P55854 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.76□□□□□ -1.33
SUMO3P55854 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 RNA5SP448-201ENST00000363151 111 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.76□□□□□ -1.33
SUMO3P55854 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 RNU6-1176P-201ENST00000390955 107 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.76□□□□□ -1.33
SUMO3P55854 AC009237.9-201ENST00000414800 347 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 GTF3AP1-201ENST00000416942 1004 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 AC231533.2-201ENST00000419045 978 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.76□□□□□ -1.33
SUMO3P55854 AC023141.6-201ENST00000429418 337 ntBASIC6.76□□□□□ -1.33
SUMO3P55854 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SUMO3P55854 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.76□□□□□ -1.33
SUMO3P55854 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.76□□□□□ -1.33
SUMO3P55854 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC6.76□□□□□ -1.33
SUMO3P55854 CDC42P2-201ENST00000448566 569 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms