Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 OR7E1P-201ENST00000533891 958 ntBASIC6.8□□□□□ -1.32
SNX18Q96RF0 PSMC1P8-201ENST00000536820 1296 ntBASIC6.8□□□□□ -1.32
SNX18Q96RF0 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 AC103968.1-201ENST00000557841 573 ntBASIC6.8□□□□□ -1.32
SNX18Q96RF0 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 RPL35AP25-201ENST00000584631 330 ntBASIC6.8□□□□□ -1.32
SNX18Q96RF0 AC060766.6-201ENST00000589099 394 ntTSL 3 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 AC005034.3-201ENST00000604845 1747 ntBASIC6.8□□□□□ -1.32
SNX18Q96RF0 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SNX18Q96RF0 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 AC012511.1-201ENST00000608140 449 ntBASIC6.8□□□□□ -1.32
SNX18Q96RF0 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SNX18Q96RF0 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SNX18Q96RF0 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SNX18Q96RF0 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SNX18Q96RF0 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SNX18Q96RF0 AL353795.1-201ENST00000439134 1775 ntBASIC6.8□□□□□ -1.32
SNX18Q96RF0 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 OR9K2-201ENST00000305377 1122 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 RNU1-122P-201ENST00000365538 156 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 RNU2-72P-201ENST00000411175 163 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 PYHIN5P-201ENST00000431627 723 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 AL139135.2-201ENST00000445040 433 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 RN7SL36P-201ENST00000469345 276 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 RPL7AP56-201ENST00000476420 791 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 RN7SL153P-201ENST00000486501 292 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 MTCO1P55-201ENST00000489829 745 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 ADI1P2-201ENST00000514945 429 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 AP004607.6-201ENST00000525033 1202 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 MIR4793-201ENST00000577502 87 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 LINC00674-202ENST00000590734 160 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 AL021807.1-201ENST00000607175 565 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 AL355816.2-201ENST00000610049 647 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 MFSD8-234ENST00000641503 1082 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 MAPK10-383ENST00000642032 3390 ntBASIC6.79□□□□□ -1.32
SNX18Q96RF0 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.79□□□□□ -1.32
SNX18Q96RF0 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SNX18Q96RF0 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 AC027313.1-201ENST00000509159 1666 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 EEF1A1P15-201ENST00000395772 1408 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
SNX18Q96RF0 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SNX18Q96RF0 RNU4-23P-201ENST00000362839 140 ntBASIC6.78□□□□□ -1.32
SNX18Q96RF0 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms