Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 AP002991.2-201ENST00000623807 2801 ntBASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 MFSD8-220ENST00000641243 1422 ntBASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 NACA-216ENST00000550952 2922 ntTSL 2 BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 CDYLP1-201ENST00000419017 1458 ntBASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SHKBP1Q8TBC3 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC008555.1-201ENST00000561778 2757 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC016722.2-201ENST00000429761 1835 ntTSL 2 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 PSMD10-203ENST00000340200 713 ntTSL 3 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 RN7SKP257-201ENST00000364525 309 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 RN7SKP236-201ENST00000410635 284 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 SNX18P13-201ENST00000412442 529 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 CLIC4P3-201ENST00000422221 752 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 NDUFA5P1-201ENST00000433858 341 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 MTCYBP21-201ENST00000443300 1113 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 RPL7P61-201ENST00000451721 751 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC016489.1-201ENST00000461109 375 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 RN7SL36P-201ENST00000469345 276 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 CASP1P2-201ENST00000526830 1258 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AP001994.1-201ENST00000527539 826 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 CHCHD3P2-201ENST00000550751 639 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AL132857.1-201ENST00000555180 708 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 MIR3137-201ENST00000577367 75 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC100832.2-201ENST00000582080 776 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 BNIP3P30-201ENST00000601184 574 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 SNX6P1-201ENST00000601728 1224 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC016727.1-205ENST00000605437 569 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 5S_rRNA.20-201ENST00000612104 118 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AL157359.3-201ENST00000623771 217 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC092608.3-201ENST00000625017 386 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 ATM-229ENST00000639953 587 ntTSL 5 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AC138207.6-201ENST00000579164 1967 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 PARP1P1-201ENST00000413631 3026 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 SLC16A1P1-201ENST00000486743 1510 ntBASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC8.18□□□□□ -1.1
SHKBP1Q8TBC3 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 TNFSF15-201ENST00000374044 2789 ntBASIC8.17□□□□□ -1.1
SHKBP1Q8TBC3 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms