Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CCNC-215ENST00000523799 1035 ntTSL 3 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 RN7SL786P-201ENST00000579130 298 ntBASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 AC183089.2-201ENST00000637931 916 ntBASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 DDX50P1-201ENST00000438163 2400 ntBASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 AL162171.3-201ENST00000617439 3178 ntBASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.62□□□□□ -1.19
CCDC50Q8IVM0 SAMMSON-203ENST00000641005 2168 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AL022323.4-201ENST00000623980 13120 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 MIR181C-201ENST00000384881 110 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 RPSAP59-201ENST00000421048 890 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AL354983.1-201ENST00000434580 906 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 OR7E62P-201ENST00000456741 477 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC117395.2-201ENST00000463122 1128 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 RPS12P20-201ENST00000464109 380 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 RN7SL263P-201ENST00000467969 290 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 RPL23P10-201ENST00000468780 412 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 RPL5P12-201ENST00000477071 851 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC087360.1-201ENST00000518788 616 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC092368.2-201ENST00000565911 600 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AL390058.1-201ENST00000603834 629 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 FAM74A6-203ENST00000615956 481 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC243830.2-201ENST00000618067 630 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AP000842.4-201ENST00000638781 748 ntBASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CCDC50Q8IVM0 AC122713.2-201ENST00000624942 3335 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 RN7SKP36-201ENST00000363997 312 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 RNA5SP238-201ENST00000365464 120 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 NRIR-201ENST00000366140 799 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 AL355862.1-201ENST00000412705 353 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 AC231533.2-201ENST00000419045 978 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 RPL5P27-201ENST00000437011 881 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 AL731892.1-201ENST00000437364 1192 ntBASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC50Q8IVM0 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 686.8 ms