Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
UBE4BO95155 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.84□□□□□ -1.15
UBE4BO95155 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
UBE4BO95155 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.84□□□□□ -1.15
UBE4BO95155 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.84□□□□□ -1.15
UBE4BO95155 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
UBE4BO95155 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
UBE4BO95155 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.84□□□□□ -1.15
UBE4BO95155 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
UBE4BO95155 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
UBE4BO95155 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
UBE4BO95155 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
UBE4BO95155 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
UBE4BO95155 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
UBE4BO95155 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.84□□□□□ -1.15
UBE4BO95155 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
UBE4BO95155 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
UBE4BO95155 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
UBE4BO95155 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
UBE4BO95155 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
UBE4BO95155 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.83□□□□□ -1.16
UBE4BO95155 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
UBE4BO95155 RPL10P16-201ENST00000325000 645 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 RNA5SP472-201ENST00000363868 119 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7.83□□□□□ -1.16
UBE4BO95155 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
UBE4BO95155 MIR152-201ENST00000385212 87 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.83□□□□□ -1.16
UBE4BO95155 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.83□□□□□ -1.16
UBE4BO95155 VN1R66P-201ENST00000412929 916 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 AL773545.3-201ENST00000414297 706 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 CYP4F32P-201ENST00000426492 504 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 DBIL5P2-201ENST00000443827 253 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 AL034399.1-201ENST00000451535 380 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 SNORA35.1-201ENST00000458908 128 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 AC021074.2-201ENST00000468434 172 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.83□□□□□ -1.16
UBE4BO95155 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
UBE4BO95155 MIR744-201ENST00000578242 98 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 AC139792.1-201ENST00000607051 647 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.83□□□□□ -1.16
UBE4BO95155 pRNA.9-201ENST00000618609 89 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.83□□□□□ -1.16
UBE4BO95155 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.83□□□□□ -1.16
UBE4BO95155 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.83□□□□□ -1.16
UBE4BO95155 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
UBE4BO95155 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
UBE4BO95155 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
UBE4BO95155 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.83□□□□□ -1.16
UBE4BO95155 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
UBE4BO95155 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
UBE4BO95155 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.83□□□□□ -1.16
UBE4BO95155 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.83□□□□□ -1.16
UBE4BO95155 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
UBE4BO95155 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.83□□□□□ -1.16
UBE4BO95155 AL121949.2-201ENST00000403446 1548 ntBASIC7.83□□□□□ -1.16
UBE4BO95155 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
UBE4BO95155 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.83□□□□□ -1.16
UBE4BO95155 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.83□□□□□ -1.16
UBE4BO95155 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
UBE4BO95155 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
UBE4BO95155 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.82□□□□□ -1.16
UBE4BO95155 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
UBE4BO95155 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
UBE4BO95155 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.82□□□□□ -1.16
UBE4BO95155 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.82□□□□□ -1.16
UBE4BO95155 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
UBE4BO95155 RNU4-81P-201ENST00000363561 144 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 U3.14-201ENST00000365363 227 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 MIR199B-201ENST00000384849 110 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 FAUP2-201ENST00000394301 401 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.82□□□□□ -1.16
UBE4BO95155 CLIC4P3-201ENST00000422221 752 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 PRKAR1AP1-201ENST00000441422 1162 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 RPL21P33-201ENST00000444831 484 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
UBE4BO95155 WBP1LP1-201ENST00000460451 896 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
UBE4BO95155 MYL6P4-201ENST00000477911 453 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 RPS4XP23-201ENST00000487801 237 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
UBE4BO95155 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.82□□□□□ -1.16
UBE4BO95155 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC7.82□□□□□ -1.16
UBE4BO95155 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC7.82□□□□□ -1.16
UBE4BO95155 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
UBE4BO95155 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.82□□□□□ -1.16
UBE4BO95155 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.82□□□□□ -1.16
UBE4BO95155 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC7.82□□□□□ -1.16
UBE4BO95155 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
UBE4BO95155 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.82□□□□□ -1.16
UBE4BO95155 AC090971.3-201ENST00000557871 1041 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.82□□□□□ -1.16
UBE4BO95155 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.82□□□□□ -1.16
UBE4BO95155 EXOSC3P2-201ENST00000594464 497 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 AC005070.2-201ENST00000604391 260 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 MIR6731-201ENST00000614863 72 ntBASIC7.82□□□□□ -1.16
UBE4BO95155 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
UBE4BO95155 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms