Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.46□□□□□ -1.22
CCDC78A2IDD5 AC098590.2-201ENST00000614787 281 ntBASIC7.46□□□□□ -1.22
CCDC78A2IDD5 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 AC087072.2-201ENST00000621060 682 ntBASIC7.46□□□□□ -1.22
CCDC78A2IDD5 AP003072.5-201ENST00000623872 773 ntBASIC7.46□□□□□ -1.22
CCDC78A2IDD5 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.46□□□□□ -1.22
CCDC78A2IDD5 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AL391380.1-201ENST00000439300 1432 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 DDX50P1-201ENST00000438163 2400 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 RN7SKP63-201ENST00000363187 301 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 LSM5-202ENST00000409292 538 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 RN7SKP131-201ENST00000410698 301 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AC127537.1-201ENST00000418183 748 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 VN1R53P-201ENST00000429536 957 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 GLRXP3-201ENST00000470810 321 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AC009153.1-201ENST00000485799 496 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 MTND3P3-201ENST00000505004 126 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AC006070.1-201ENST00000508151 193 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 COL6A4P2-205ENST00000509855 506 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 OSTC-204ENST00000512478 663 ntTSL 5 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 MIR4786-201ENST00000583954 80 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 BOLA2P1-201ENST00000584794 232 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 MIR7162-201ENST00000611134 69 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AC107905.1-201ENST00000616204 426 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 BX005195.1-201ENST00000618097 1198 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AC020978.9-201ENST00000624380 1141 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AC022743.1-201ENST00000624990 664 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 TEX41-271ENST00000628213 993 ntTSL 5 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AP000842.4-201ENST00000638781 748 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 AC022306.1-201ENST00000560489 1562 ntBASIC7.45□□□□□ -1.22
CCDC78A2IDD5 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC78A2IDD5 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC78A2IDD5 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC78A2IDD5 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC78A2IDD5 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC78A2IDD5 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC78A2IDD5 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC78A2IDD5 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CCDC78A2IDD5 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CCDC78A2IDD5 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC78A2IDD5 VEZF1P1-201ENST00000423931 1541 ntBASIC7.44□□□□□ -1.22
CCDC78A2IDD5 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC78A2IDD5 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC78A2IDD5 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms