Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HLA-DRB4X5D2U9 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 HDAC1P1-201ENST00000455482 1445 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SKP36-201ENST00000363997 312 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC113608.1-201ENST00000398740 305 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 RPL6P2-201ENST00000425480 783 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 DEFA11P-201ENST00000446470 261 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 CDC42P2-201ENST00000448566 569 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 OR7E62P-201ENST00000456741 477 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC084878.1-201ENST00000480555 648 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SL314P-201ENST00000490735 292 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SKP233-201ENST00000517005 110 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 OR5F2P-201ENST00000532761 941 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC018558.5-201ENST00000565840 952 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 MIR4262-201ENST00000578394 54 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 RN7SL835P-201ENST00000579920 262 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 NDUFA3P1-201ENST00000588007 252 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AP001120.4-201ENST00000590231 108 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC097376.1-201ENST00000602907 997 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 uc_338.33-201ENST00000614988 170 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC243830.2-201ENST00000618067 630 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC010320.5-201ENST00000619124 676 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC119674.1-209ENST00000642031 997 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 SOCS5P5-201ENST00000402732 1586 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AC090643.1-201ENST00000623600 3100 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AL133320.1-201ENST00000621423 2352 ntBASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DRB4X5D2U9 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 WBP11P1-201ENST00000562560 1931 ntBASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DRB4X5D2U9 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms