Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC8.74□□□□□ -1.01
HMG20BQ9P0W2 AL139254.2-202ENST00000641937 1156 ntBASIC8.74□□□□□ -1.01
HMG20BQ9P0W2 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
HMG20BQ9P0W2 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
HMG20BQ9P0W2 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
HMG20BQ9P0W2 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
HMG20BQ9P0W2 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC8.74□□□□□ -1.01
HMG20BQ9P0W2 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
HMG20BQ9P0W2 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
HMG20BQ9P0W2 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
HMG20BQ9P0W2 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
HMG20BQ9P0W2 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AL356361.1-201ENST00000400943 1459 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AL162171.3-201ENST00000617439 3178 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 RNA5SP429-201ENST00000363688 109 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AC244452.1-201ENST00000413798 141 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AC114402.2-201ENST00000432760 643 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 SLAMF6P1-201ENST00000451067 602 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 SRP68P2-201ENST00000456184 254 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 VN1R6P-201ENST00000458417 907 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 RN7SL88P-201ENST00000480166 299 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AC130366.1-201ENST00000526505 1192 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 SSU72P6-201ENST00000532644 488 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AL031846.1-201ENST00000560933 314 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AC091059.2-201ENST00000623355 614 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AC087894.3-201ENST00000623682 349 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AC126474.2-201ENST00000623268 1750 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 OR4C1P-202ENST00000641065 1569 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 EEF1A1P20-201ENST00000514852 1386 ntBASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HMG20BQ9P0W2 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 RN7SKP107-201ENST00000364157 290 ntBASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 OR7E7P-201ENST00000455678 1012 ntBASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 GAPDHP53-201ENST00000458397 924 ntBASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 RN7SL518P-201ENST00000491887 280 ntBASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 AC027801.3-201ENST00000515049 698 ntBASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 SCARNA18.2-201ENST00000516882 84 ntBASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 IGHVII-51-2-201ENST00000519778 259 ntBASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 LDHC-204ENST00000536880 957 ntTSL 5 BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 MIR6774-201ENST00000614651 70 ntBASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
HMG20BQ9P0W2 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.71□□□□□ -1.01
HMG20BQ9P0W2 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
HMG20BQ9P0W2 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.71□□□□□ -1.01
HMG20BQ9P0W2 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
HMG20BQ9P0W2 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
HMG20BQ9P0W2 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
HMG20BQ9P0W2 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms