Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AP001033.2-201ENST00000609701 1003 ntBASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 AC016590.3-201ENST00000611171 753 ntBASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 AC023310.4-201ENST00000613130 650 ntBASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 AC005383.1-201ENST00000622689 534 ntBASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 AC005609.2-201ENST00000623320 592 ntBASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 AC004808.1-201ENST00000627671 721 ntBASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 SEPT7P7-201ENST00000420492 1301 ntBASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.5□□□□□ -1.21
TRIM48Q8IWZ4 AL355974.1-201ENST00000618896 1708 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 MAPK10-347ENST00000641762 2856 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 RNA5SP79-201ENST00000365193 109 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 SNORA30B-201ENST00000365319 129 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 RN7SKP1-201ENST00000365525 307 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AL512504.1-201ENST00000415494 778 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 VPS26BP1-201ENST00000417155 755 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AL445528.1-201ENST00000426330 420 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 SNX18P9-201ENST00000440580 835 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 ARMC8P1-201ENST00000443069 1289 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC079768.1-201ENST00000503181 711 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC021146.5-201ENST00000503544 545 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 RPEP1-201ENST00000504507 658 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 GAPDHP61-201ENST00000507324 1005 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC009879.1-201ENST00000520029 839 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC130364.2-201ENST00000528639 604 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 OR7A11P-201ENST00000597719 953 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC091057.3-201ENST00000602684 733 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 MTATP6P2-201ENST00000603319 678 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC114878.2-201ENST00000604863 1251 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 SNORD91A-202ENST00000609620 191 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC005156.1-201ENST00000613371 573 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC143336.1-201ENST00000614164 836 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AL163051.2-201ENST00000618976 735 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AP000943.4-201ENST00000622912 357 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 TMEM30CP-203ENST00000637814 1035 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AL031123.3-201ENST00000623345 1837 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 AC018992.1-201ENST00000523778 2149 ntBASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
TRIM48Q8IWZ4 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms