Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RPL39P62891 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPL39P62891 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 AL139384.2-201ENST00000613809 3590 ntBASIC4.98□□□□□ -1.61
RPL39P62891 AC062029.1-202ENST00000606164 3651 ntBASIC4.98□□□□□ -1.61
RPL39P62891 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC4.98□□□□□ -1.61
RPL39P62891 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
RPL39P62891 AC010168.2-201ENST00000562691 5428 ntBASIC4.98□□□□□ -1.61
RPL39P62891 DEFB105B-201ENST00000335510 331 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 RNU1-47P-201ENST00000362966 163 ntBASIC4.98□□□□□ -1.61
RPL39P62891 RN7SKP36-201ENST00000363997 312 ntBASIC4.98□□□□□ -1.61
RPL39P62891 RNA5SP238-201ENST00000365464 120 ntBASIC4.98□□□□□ -1.61
RPL39P62891 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RPL39P62891 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RPL39P62891 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RPL39P62891 RPL9P21-201ENST00000392269 505 ntBASIC4.98□□□□□ -1.61
RPL39P62891 HMGB3P1-201ENST00000393368 573 ntBASIC4.98□□□□□ -1.61
RPL39P62891 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC4.98□□□□□ -1.61
RPL39P62891 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 AC009413.1-201ENST00000414823 399 ntBASIC4.98□□□□□ -1.61
RPL39P62891 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC4.98□□□□□ -1.61
RPL39P62891 MTND6P1-201ENST00000417434 424 ntBASIC4.98□□□□□ -1.61
RPL39P62891 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 RPL7P7-201ENST00000428803 703 ntBASIC4.98□□□□□ -1.61
RPL39P62891 SNX18P14-201ENST00000429308 574 ntBASIC4.98□□□□□ -1.61
RPL39P62891 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 AP1B1P1-202ENST00000448124 191 ntBASIC4.98□□□□□ -1.61
RPL39P62891 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 CREM-242ENST00000490511 469 ntTSL 2 BASIC4.98□□□□□ -1.61
RPL39P62891 AL031073.1-201ENST00000503029 1139 ntBASIC4.98□□□□□ -1.61
RPL39P62891 AC253576.1-201ENST00000511645 1156 ntBASIC4.98□□□□□ -1.61
RPL39P62891 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC4.98□□□□□ -1.61
RPL39P62891 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RPL39P62891 AP003385.2-201ENST00000524910 973 ntBASIC4.98□□□□□ -1.61
RPL39P62891 OR9L1P-201ENST00000529493 933 ntBASIC4.98□□□□□ -1.61
RPL39P62891 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC4.98□□□□□ -1.61
RPL39P62891 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC4.98□□□□□ -1.61
RPL39P62891 AC087575.1-201ENST00000585087 229 ntBASIC4.98□□□□□ -1.61
RPL39P62891 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC4.98□□□□□ -1.61
RPL39P62891 AC079414.3-201ENST00000612986 1090 ntBASIC4.98□□□□□ -1.61
RPL39P62891 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC4.98□□□□□ -1.61
RPL39P62891 AC090373.1-201ENST00000623955 603 ntBASIC4.98□□□□□ -1.61
RPL39P62891 FLII-230ENST00000628188 156 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 TTC38-207ENST00000629918 162 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 GAS2-210ENST00000630668 674 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 AL590396.3-201ENST00000636334 300 ntBASIC4.98□□□□□ -1.61
RPL39P62891 HCCAT5-202ENST00000642127 1029 ntBASIC4.98□□□□□ -1.61
RPL39P62891 FO082842.1-201ENST00000423552 1370 ntBASIC4.98□□□□□ -1.61
RPL39P62891 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC4.98□□□□□ -1.61
RPL39P62891 TRIM51FP-201ENST00000526452 1353 ntBASIC4.98□□□□□ -1.61
RPL39P62891 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 TPTE2P2-201ENST00000403471 1466 ntBASIC4.98□□□□□ -1.61
RPL39P62891 SOCS5P5-201ENST00000402732 1586 ntBASIC4.98□□□□□ -1.61
RPL39P62891 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPL39P62891 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RPL39P62891 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC4.98□□□□□ -1.61
RPL39P62891 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RPL39P62891 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC4.97□□□□□ -1.61
RPL39P62891 TRIM60P14-201ENST00000513444 1419 ntBASIC4.97□□□□□ -1.61
RPL39P62891 AC073342.2-201ENST00000595842 1800 ntBASIC4.97□□□□□ -1.61
RPL39P62891 BRD7P1-201ENST00000557705 1915 ntBASIC4.97□□□□□ -1.61
RPL39P62891 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
RPL39P62891 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC4.97□□□□□ -1.61
RPL39P62891 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RPL39P62891 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC4.97□□□□□ -1.61
RPL39P62891 PIK3C3-204ENST00000586545 1554 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPL39P62891 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms