Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 HSFY5P-201ENST00000453726 309 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 AC015820.1-201ENST00000473882 321 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
SUMO3P55854 AC084871.2-201ENST00000503355 464 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.8□□□□□ -1.32
SUMO3P55854 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.8□□□□□ -1.32
SUMO3P55854 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC6.8□□□□□ -1.32
SUMO3P55854 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.8□□□□□ -1.32
SUMO3P55854 IGKV2-29-201ENST00000521304 372 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.8□□□□□ -1.32
SUMO3P55854 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.8□□□□□ -1.32
SUMO3P55854 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.8□□□□□ -1.32
SUMO3P55854 AF186192.2-204ENST00000581667 524 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.8□□□□□ -1.32
SUMO3P55854 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC6.8□□□□□ -1.32
SUMO3P55854 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.8□□□□□ -1.32
SUMO3P55854 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC6.8□□□□□ -1.32
SUMO3P55854 OR7E94P-202ENST00000601375 790 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 AC097376.1-201ENST00000602907 997 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 AC007262.1-201ENST00000604099 321 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC6.8□□□□□ -1.32
SUMO3P55854 AC006449.1-201ENST00000616263 571 ntTSL 4 BASIC6.8□□□□□ -1.32
SUMO3P55854 AC087072.2-201ENST00000621060 682 ntBASIC6.8□□□□□ -1.32
SUMO3P55854 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.8□□□□□ -1.32
SUMO3P55854 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC6.8□□□□□ -1.32
SUMO3P55854 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
SUMO3P55854 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
SUMO3P55854 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC6.8□□□□□ -1.32
SUMO3P55854 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
SUMO3P55854 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SUMO3P55854 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC6.8□□□□□ -1.32
SUMO3P55854 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 SF3A3P1-201ENST00000446317 1477 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.79□□□□□ -1.32
SUMO3P55854 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 MAPK10-354ENST00000641823 2732 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
SUMO3P55854 AC110716.2-201ENST00000563865 3945 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 WNK1-220ENST00000574564 1401 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC6.79□□□□□ -1.32
SUMO3P55854 RBMX2P2-201ENST00000257020 946 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 AL078621.1-201ENST00000272567 768 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
SUMO3P55854 RNA5SP301-201ENST00000362537 121 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 RNU6-1331P-201ENST00000363658 106 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SUMO3P55854 AC113608.1-201ENST00000398740 305 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 RN7SKP225-201ENST00000410405 352 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 FABP5P1-201ENST00000423401 411 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC6.79□□□□□ -1.32
SUMO3P55854 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.79□□□□□ -1.32
SUMO3P55854 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.79□□□□□ -1.32
SUMO3P55854 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.79□□□□□ -1.32
SUMO3P55854 RPL24P8-201ENST00000446071 474 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 AL451074.4-201ENST00000447545 470 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 MTND2P25-201ENST00000449028 610 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 ATP5G1P6-201ENST00000451206 412 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.79□□□□□ -1.32
SUMO3P55854 AC009153.1-201ENST00000485799 496 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 RNU6-1334P-201ENST00000516032 105 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SUMO3P55854 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.79□□□□□ -1.32
SUMO3P55854 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.79□□□□□ -1.32
SUMO3P55854 BMS1P8-201ENST00000565049 1178 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC6.79□□□□□ -1.32
SUMO3P55854 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC6.79□□□□□ -1.32
SUMO3P55854 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SUMO3P55854 AL671309.1-201ENST00000603750 544 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 AL136985.2-201ENST00000607372 535 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 AC135050.6-202ENST00000613584 392 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 AC097372.4-201ENST00000625025 466 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 AL590396.2-201ENST00000636511 1041 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 OR5AU1-204ENST00000641822 1197 ntBASIC6.79□□□□□ -1.32
SUMO3P55854 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SUMO3P55854 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC6.79□□□□□ -1.32
SUMO3P55854 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms