Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.66□□□□□ -1.18
NEK3P51956 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
NEK3P51956 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
NEK3P51956 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NEK3P51956 AC034111.1-201ENST00000562143 3770 ntBASIC7.65□□□□□ -1.18
NEK3P51956 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEK3P51956 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEK3P51956 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEK3P51956 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEK3P51956 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NEK3P51956 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
NEK3P51956 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NEK3P51956 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NEK3P51956 U3.31-201ENST00000408113 216 ntBASIC7.65□□□□□ -1.18
NEK3P51956 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.65□□□□□ -1.18
NEK3P51956 AC023141.10-201ENST00000415634 200 ntBASIC7.65□□□□□ -1.18
NEK3P51956 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NEK3P51956 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
NEK3P51956 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NEK3P51956 GAPDHP73-201ENST00000423411 1007 ntBASIC7.65□□□□□ -1.18
NEK3P51956 VEZF1P1-201ENST00000423931 1541 ntBASIC7.65□□□□□ -1.18
NEK3P51956 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
NEK3P51956 SNX18P14-201ENST00000429308 574 ntBASIC7.65□□□□□ -1.18
NEK3P51956 ARL4AP4-201ENST00000434170 518 ntBASIC7.65□□□□□ -1.18
NEK3P51956 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEK3P51956 RAD1P2-201ENST00000446414 663 ntBASIC7.65□□□□□ -1.18
NEK3P51956 OR52I1-201ENST00000450052 1050 ntBASIC7.65□□□□□ -1.18
NEK3P51956 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NEK3P51956 RN7SL233P-201ENST00000469988 277 ntBASIC7.65□□□□□ -1.18
NEK3P51956 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.65□□□□□ -1.18
NEK3P51956 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.65□□□□□ -1.18
NEK3P51956 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC7.65□□□□□ -1.18
NEK3P51956 AC095059.2-201ENST00000510601 933 ntBASIC7.65□□□□□ -1.18
NEK3P51956 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.65□□□□□ -1.18
NEK3P51956 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC7.65□□□□□ -1.18
NEK3P51956 SCARNA20.1-201ENST00000516009 138 ntBASIC7.65□□□□□ -1.18
NEK3P51956 AC090132.1-201ENST00000524071 1480 ntBASIC7.65□□□□□ -1.18
NEK3P51956 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.65□□□□□ -1.18
NEK3P51956 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.65□□□□□ -1.18
NEK3P51956 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC7.65□□□□□ -1.18
NEK3P51956 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.65□□□□□ -1.18
NEK3P51956 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.65□□□□□ -1.18
NEK3P51956 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC7.65□□□□□ -1.18
NEK3P51956 AC011270.1-201ENST00000558606 583 ntBASIC7.65□□□□□ -1.18
NEK3P51956 AL137802.2-201ENST00000562878 1110 ntBASIC7.65□□□□□ -1.18
NEK3P51956 AC012181.2-201ENST00000570210 699 ntBASIC7.65□□□□□ -1.18
NEK3P51956 AC133552.3-201ENST00000572236 1869 ntBASIC7.65□□□□□ -1.18
NEK3P51956 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7.65□□□□□ -1.18
NEK3P51956 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC7.65□□□□□ -1.18
NEK3P51956 AC061975.7-201ENST00000592016 2692 ntBASIC7.65□□□□□ -1.18
NEK3P51956 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC7.65□□□□□ -1.18
NEK3P51956 AC008385.1-201ENST00000604421 355 ntBASIC7.65□□□□□ -1.18
NEK3P51956 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
NEK3P51956 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.65□□□□□ -1.18
NEK3P51956 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
NEK3P51956 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.65□□□□□ -1.19
NEK3P51956 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.65□□□□□ -1.19
NEK3P51956 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.64□□□□□ -1.19
NEK3P51956 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
NEK3P51956 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
NEK3P51956 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
NEK3P51956 AL606490.2-201ENST00000457562 1330 ntBASIC7.64□□□□□ -1.19
NEK3P51956 RN7SKP211-201ENST00000363328 315 ntBASIC7.64□□□□□ -1.19
NEK3P51956 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 GAS8-AS1-201ENST00000408886 435 ntBASIC7.64□□□□□ -1.19
NEK3P51956 ZNF92P1Y-201ENST00000415010 1191 ntBASIC7.64□□□□□ -1.19
NEK3P51956 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.64□□□□□ -1.19
NEK3P51956 RPL35P8-201ENST00000433284 337 ntBASIC7.64□□□□□ -1.19
NEK3P51956 AC092421.1-201ENST00000448148 418 ntBASIC7.64□□□□□ -1.19
NEK3P51956 AL031736.1-201ENST00000449688 618 ntBASIC7.64□□□□□ -1.19
NEK3P51956 AL929410.2-201ENST00000451170 189 ntBASIC7.64□□□□□ -1.19
NEK3P51956 AC012493.1-201ENST00000453252 760 ntBASIC7.64□□□□□ -1.19
NEK3P51956 AC013429.1-201ENST00000456604 422 ntBASIC7.64□□□□□ -1.19
NEK3P51956 AL390026.1-201ENST00000456647 457 ntBASIC7.64□□□□□ -1.19
NEK3P51956 RN7SL145P-201ENST00000469955 296 ntBASIC7.64□□□□□ -1.19
NEK3P51956 AK5-208ENST00000478255 556 ntTSL 2 BASIC7.64□□□□□ -1.19
NEK3P51956 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC7.64□□□□□ -1.19
NEK3P51956 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC7.64□□□□□ -1.19
NEK3P51956 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC7.64□□□□□ -1.19
NEK3P51956 AP005597.2-201ENST00000526238 341 ntBASIC7.64□□□□□ -1.19
NEK3P51956 OR7E96P-201ENST00000530816 976 ntBASIC7.64□□□□□ -1.19
NEK3P51956 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.64□□□□□ -1.19
NEK3P51956 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC7.64□□□□□ -1.19
NEK3P51956 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NEK3P51956 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC7.64□□□□□ -1.19
NEK3P51956 AC100832.2-201ENST00000582080 776 ntBASIC7.64□□□□□ -1.19
NEK3P51956 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC7.64□□□□□ -1.19
NEK3P51956 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC7.64□□□□□ -1.19
NEK3P51956 OR5AH1P-201ENST00000595968 283 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms