Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.65□□□□□ -1.35
SSX4O60224 TCTN1-201ENST00000377654 1539 ntTSL 5 BASIC6.65□□□□□ -1.35
SSX4O60224 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
SSX4O60224 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.65□□□□□ -1.35
SSX4O60224 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.65□□□□□ -1.35
SSX4O60224 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SSX4O60224 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
SSX4O60224 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
SSX4O60224 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SSX4O60224 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SSX4O60224 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SSX4O60224 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
SSX4O60224 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SSX4O60224 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
SSX4O60224 AL590065.1-201ENST00000603371 4774 ntBASIC6.64□□□□□ -1.35
SSX4O60224 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.64□□□□□ -1.35
SSX4O60224 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
SSX4O60224 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SSX4O60224 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SSX4O60224 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SSX4O60224 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SSX4O60224 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
SSX4O60224 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC6.64□□□□□ -1.35
SSX4O60224 AL080285.1-201ENST00000404225 984 ntBASIC6.64□□□□□ -1.35
SSX4O60224 AL773545.3-201ENST00000414297 706 ntBASIC6.64□□□□□ -1.35
SSX4O60224 AC009237.9-201ENST00000414800 347 ntBASIC6.64□□□□□ -1.35
SSX4O60224 RBMY2GP-201ENST00000418671 1034 ntBASIC6.64□□□□□ -1.35
SSX4O60224 AL354794.2-201ENST00000424795 1248 ntBASIC6.64□□□□□ -1.35
SSX4O60224 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.64□□□□□ -1.35
SSX4O60224 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.64□□□□□ -1.35
SSX4O60224 RBMY2NP-201ENST00000434454 1028 ntBASIC6.64□□□□□ -1.35
SSX4O60224 ARMC8P1-201ENST00000443069 1289 ntBASIC6.64□□□□□ -1.35
SSX4O60224 CEACAMP5-201ENST00000448037 961 ntBASIC6.64□□□□□ -1.35
SSX4O60224 AL359839.1-201ENST00000451975 1160 ntBASIC6.64□□□□□ -1.35
SSX4O60224 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC6.64□□□□□ -1.35
SSX4O60224 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC6.64□□□□□ -1.35
SSX4O60224 VN1R6P-201ENST00000458417 907 ntBASIC6.64□□□□□ -1.35
SSX4O60224 RN7SL834P-201ENST00000461450 286 ntBASIC6.64□□□□□ -1.35
SSX4O60224 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.64□□□□□ -1.35
SSX4O60224 AP001124.1-201ENST00000529628 385 ntBASIC6.64□□□□□ -1.35
SSX4O60224 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC6.64□□□□□ -1.35
SSX4O60224 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC6.64□□□□□ -1.35
SSX4O60224 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.64□□□□□ -1.35
SSX4O60224 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC6.64□□□□□ -1.35
SSX4O60224 MIR5192-201ENST00000579892 92 ntBASIC6.64□□□□□ -1.35
SSX4O60224 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.64□□□□□ -1.35
SSX4O60224 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC6.64□□□□□ -1.35
SSX4O60224 AC139493.1-201ENST00000604368 397 ntBASIC6.64□□□□□ -1.35
SSX4O60224 AL109936.2-201ENST00000605350 650 ntBASIC6.64□□□□□ -1.35
SSX4O60224 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
SSX4O60224 AC087821.1-201ENST00000623639 567 ntBASIC6.64□□□□□ -1.35
SSX4O60224 OR5AU1-204ENST00000641822 1197 ntBASIC6.64□□□□□ -1.35
SSX4O60224 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SSX4O60224 CYP2C19-202ENST00000480405 1417 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SSX4O60224 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.64□□□□□ -1.35
SSX4O60224 AC089998.1-201ENST00000548575 3141 ntBASIC6.64□□□□□ -1.35
SSX4O60224 AC079178.2-201ENST00000439323 1624 ntBASIC6.64□□□□□ -1.35
SSX4O60224 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.64□□□□□ -1.35
SSX4O60224 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.64□□□□□ -1.35
SSX4O60224 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.64□□□□□ -1.35
SSX4O60224 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.64□□□□□ -1.35
SSX4O60224 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SSX4O60224 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
SSX4O60224 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 RN7SKP77-201ENST00000363261 353 ntBASIC6.63□□□□□ -1.35
SSX4O60224 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.63□□□□□ -1.35
SSX4O60224 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC6.63□□□□□ -1.35
SSX4O60224 AL035696.2-201ENST00000407941 709 ntBASIC6.63□□□□□ -1.35
SSX4O60224 AL358942.1-201ENST00000418595 1178 ntBASIC6.63□□□□□ -1.35
SSX4O60224 CLIC4P3-201ENST00000422221 752 ntBASIC6.63□□□□□ -1.35
SSX4O60224 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.63□□□□□ -1.35
SSX4O60224 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC6.63□□□□□ -1.35
SSX4O60224 TCEAL4P1-201ENST00000453620 588 ntBASIC6.63□□□□□ -1.35
SSX4O60224 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.63□□□□□ -1.35
SSX4O60224 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC6.63□□□□□ -1.35
SSX4O60224 AC134698.1-201ENST00000511619 643 ntBASIC6.63□□□□□ -1.35
SSX4O60224 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC6.63□□□□□ -1.35
SSX4O60224 RN7SKP242-201ENST00000515967 289 ntBASIC6.63□□□□□ -1.35
SSX4O60224 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC6.63□□□□□ -1.35
SSX4O60224 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.63□□□□□ -1.35
SSX4O60224 AP000445.1-201ENST00000526692 741 ntBASIC6.63□□□□□ -1.35
SSX4O60224 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.63□□□□□ -1.35
SSX4O60224 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SSX4O60224 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.63□□□□□ -1.35
SSX4O60224 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.63□□□□□ -1.35
SSX4O60224 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.63□□□□□ -1.35
SSX4O60224 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.63□□□□□ -1.35
SSX4O60224 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.63□□□□□ -1.35
SSX4O60224 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC6.63□□□□□ -1.35
SSX4O60224 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC6.63□□□□□ -1.35
SSX4O60224 MIR3159-201ENST00000584572 74 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms